Sequences from confirmation amplicon


Confirmation sequences for line 824D06 and hit At5g52340 are shown.
Line ID 824D06
Locus At5g52340 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:21250642
Primers used for PCR DN34 - 8474, show primer details
   
Sequence Name 19-K101829-0022-824-D06C-8409
GenBank Accession LN494702 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>19-K101829-0022-824-D06C-8409
CATTTACATCGCTTATGTGGTGGGTCGTCGTCTCACGAATCGTAGAGGAGCGTCTCTAAC
TACACCAACAAACACATTTACATTTTTCCAATCCTCAAAAAATTTCTGAATCTTTACGCA
ACCAAAACTATTCTCTATCAATTTTCACCATCTTCTTTTTTGTTCATCGATCCAAATCAA
GAAAATGGGGGTGGCTCAAGCAATGGAAGCCCTAACCGAGCGAGCAAGTTTGATGAAAGA
GTCTTTGCATAAGAGCCAGACCATCACCGATAACATGGTCGGAATCTTAGGTTCTTTCGA
TCATCGTCTCTCGGCTCTTGAAACCGCAATGCGTCCCACACAGGTCCTTTCTTCATGATC
TCTCTGTTTTTTGGATTTTTAGAGTCTCAAGGTTGTGGAATTTGAGATCTATCTTCTGTT
GAAATTGAAATGTGATTCTGGATTTGGTGATAAAATGGTTGGCTTCTTCGACGTTTAATT
TTGGGGGTGTGATTGTGTTTGTGTAGATAAGAACACATTCTATAAGGAGAGCTCATGAGA
ATATTGACAAGGCATTGAAAGCAGCTGAGGTTATATTGGATCAATTTGATATCTCTAGAA
AGGTTTGGTGTTCTCTTTACACTCACCATACAAGATTCTCCTTTTATTTGCTTGTCTTTC
AAGCTATCATTCTGTTCCCCTTAGGTTTCCTCAAGTTAAGTGTTCTTAAGATGATAACTG
TAGACATGTTTTCTCTAGTTGAAGTTACAACTGAAACATTTGTGGAGAATGCATCATGTG
AACAGAGTAGCAA
   
Sequence Name 63-K101832-0022-824-D06C-DN34
GenBank Accession LN510951 [GenBank]
Sequencing primer gene specific primer, DN34: 5'-AGCAGACATTTGCTACTCTGTTCA-3'
Sequence (A. th genome BLAST matches underlined)
>63-K101832-0022-824-D06C-DN34
ACTTCACTAGAGAAAACATGTCTACAGTTATCATCTTAAGAACACTTAACTTGAGGAAAC
CTAAGGGGAACAGAATGATAGCTTGAAAGACAAGCAAATAAAAGGAGAATCTTGTATGGT
GAGTGTAAAGAGAACACCAAACCTTTCTAGAGATATCAAATTGATCCAATATAACCTCAG
CTGCTTTCAATGCCTTGTCAATATTCTCATGAGCTCTCCTTATAGAATGTGTTCTTATCT
ACACAAACACAATCACACCCCCAAAATTAAACGTCGAAGAAGCCAACCATTTTATCACCA
AATCCAGAATCACATTTCAATTTCAACAGAAGATAGATCTCAAATTCCACAACCTTGAGA
CTCTAAAAATCCAAAAAACAGAGAGATCATGAAGAAAGGACCTGTGTGGGACGCATTGCG
GTTTCAAGAGCCGAGAGACGATGATCGAAAGAACCTAAGATTCCGACCATGTTATCGGTG
ATGGTCTGGCTCTTATGCAAAGACTCTTTCATCAAACTTGCTCGCTCGGTTAGGGCTTCC
ATTGCTTGAGCCACCCCCATTTTCTTGATTTGGATCGATGAACAAAAAAGAAGATGGTGA
AAATTGATAGAGAATAGTTTTGGTTGCGTAAAGATTCAGAAATTTTTTGAGGATTGGAAA
AATGTAAATGTGTTTGTTGGTGTAGTTAGAGACGCTCCTCTACGATTCGTGAGACGACGA
CCCACCACATAAGCGATGGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAAT
GAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAA
AAATGTAG

Last Updated on 06.12.2018 16:11