Sequences from confirmation amplicon


Confirmation sequences for line 833A02 and hit At5g51930 are shown.
Line ID 833A02
Locus At5g51930 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:21102675
Primers used for PCR NS53 - 8474, show primer details
   
Sequence Name 25-K102500-0022-833-A02C-8409
GenBank Accession LN497385 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>25-K102500-0022-833-A02C-8409
AGTCCTGCCGTCATCTTGAGGCTCACGGCGTGAACCCACTCGTCCTAGATCAGCCCATGG
TTGGGCAGGGGATGGCTGATAATCCCATGAACTTTGTAGCCATTCCTTCTCCTCAACCAG
TAGAACTATCCCTCATACAAGCTGTTGGGATCACAAAGTTTGATAGTTACATTGAAGGTC
TAAGTGGCTTGAGTCTCTCTTTTGATATAACTCGTAGGTTTTTCGATGGTGTTTTGAATC
TTTTAAACGAGGTATATAACATAAATACATTTAAAGGTTATTTAGTTATGACTTATGAGA
TTGTATGTTGTCTAACTATGACGCATTATGCAGACAAGTCATACTACATCTAGGAAAATC
CTGACCCAATCCATTGCAGTCCTTTTAAAATCTTTTGATGTTAAATTGGAAGTGAGGATG
AATGGGGGTTTGATCTTTCAAAAAGTCGATGGACCGGCCTCAAAAGGACATATGAAGCTA
CGGAACACGAACCCAAGGGATAATCCTTCAGTGACATTCAACTACTATCAAGAACCAGAG
GATTTGAACAAGTGTGTTAAAGGGCTTAACACCATTATTAGAATGATAAATTCCAAAG
   
Sequence Name 25-K102501-0022-833-A02C-NS53
GenBank Accession LN497386 [GenBank]
Sequencing primer gene specific primer, NS53: 5'-TGTACTTGGAGAAAGCTTTGGAAT-3'
Sequence (A. th genome BLAST matches underlined)
>25-K102501-0022-833-A02C-NS53
CCTTTACACCTTGTTCAATCCTCTGGTTCTTGATAGTAGTTGACTGTCACTGAAGGATTA
TCCCTTGGGTTCGTGTTCCGTAGCTTCATATGTCCTTTTGAGGCCGGTCCATCGACTTTT
TGAAAGATCAAACCCCCATTCATCCTCACTTCCAATTTAACATCAAAAGATTTTAAAAGG
ACTGCAATGGATTGGGTCAGGATTTTCCTAGATGTAGTATGACTTGTCTGCATAATGCGT
CATAGTTAGACAACATACAATCTCATAAGTCATAACTAAATAACCTTTAAATGTATTTAT
GTTATATACCTCGTTTAAAAGATTCAAAACACCATCGAAAAACCTACGAGTTATATCAAA
AGAGAGACTCAAGCCACTTAGACCTTCAATGTAACTATCAAACTTTGTGATCCCAACAGC
TTGTATGAGGGATAGTTCTACTGGTTGAGGAGAAGGAATGGCTACAAAGTTCATGGGATT
ATCAGCCATCCCCTGCCCAACCATGGGCTGATCTAGGACGAGTGGGTTCACGCCGTGAGC
CTCAAGATGGACGGCAGGACCTACTCCATGTCCGGGAAATCTACATGGATCAGCAATGAG
TATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAA
TGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTAC
GATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTAT
TTCGACGTGTCTACATT

Last Updated on 06.12.2018 16:11