Sequences from confirmation amplicon


Confirmation sequences for line 846C05 and hit At3g17730 are shown.
Line ID 846C05
Locus At3g17730 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:6064624
Primers used for PCR KU58 - 8474, show primer details
   
Sequence Name 79-K103695-0022-846-C05C-KU58
GenBank Accession LN513818 [GenBank]
Sequencing primer gene specific primer, KU58: 5'-TTATCATCGAGACGATACTCATGC-3'
Sequence (A. th genome BLAST matches underlined)
>79-K103695-0022-846-C05C-KU58
TCTTCCTTTAAATAACAAAGTCTTTTTCTCCCAATCGCTCTGCTTTGACTTGTCACTCTC
CGATCTTTGCCGGTCGATTTCCAGTACCCACCTCTCGTTGCTCGGTTCGTCCTAAACCCG
TTCGGATACTTCCGGTCACGTGGCCCAAAAAAATACCACTCCGGATCTCTACTTGGTAGA
AACGACTTCTCTACAGTTTTATTTATCGATCACAACAACTAAAAATCAGTTCATATCATA
TTATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTAT
GATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGT
AGATGTCCGC
   
Sequence Name 83-K103696-0022-846-C05C-8409
GenBank Accession LN514304 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>83-K103696-0022-846-C05C-8409
GCCTTTACATTGAATATAATATGATATGAACTGATTTTTAGTTGTTGTGATCGATAAATA
AAACTGTAGAGAAGTCGTTTCTACCAAGTAGAGATCCGGAGTGGTATTTTTTTGGGCCAC
GTGACCGGAAGTATCCGAACGGGTTTAGGACGAACCGAGCAACGAGAGGTGGGTACTGGA
AATCGACCGGCAAAGATCGGAGAGTGACAAGTCAAAGCAGAGCGATTGGGATGAAAAAGA
CTTTGGTTTATTATAAAGGAAGAGCTCCTCAAGGGATCCGTACGGATTGGGTTATGCATG
AGTATCGTCCGNATGATA

Last Updated on 06.12.2018 16:11