Sequences from confirmation amplicon


Confirmation sequences for line SALK_000947 and hit At1g67290 are shown.
Line ID SALK_000947
Locus At1g67290 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:25192891
Primers used for PCR 60kh - LBb3, show primer details
   
Sequence Name 49-K113870-SALK_000947C-60kh
GenBank Accession LN485482 [GenBank]
Sequencing primer gene specific primer, 60kh: 5'-ACCATGTGTCTGTTGTAAGCTGTC-3'
Sequence (A. th genome BLAST matches underlined)
>49-K113870-SALK_000947C-60kh
ATCACATTACAATGTGTAAATGAATTATATTTGTAATTTCTTAATCTGCGTGATTTTAAC
TAAAACGTTATATAAAAAAGGAACGGAGGGAGTAATAATTAGTAATTTTGTTACCGCAAG
AGGCTTGATGTCTCCGGTGTTAATATCGACGAGGACAGAGTGAGCCCAACAATCAACTTT
ATTTTTTTTGGCGTCAAAAACATGGCAAGGTACGCCTGGAGGCAATTTGATTTGTGAAAT
TCTCCAAATGGTTGCGTCGTAAAACTGAACTTTATTGATCAAAGGCATCAAAATTGCGTG
CATGGCTGAAACACCAGAATTCTTCATGAATAACTCCCATTGTCCAGGCCAATTCATCTC
AGGTCCTGCGGCAAACAACCCATTGCGGACAACTTAATAACACATTGCGGACGTTTTTAA
TGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACC
GCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAA
TCCTGTTTGATGGTGGTTCCG
   
Sequence Name 57-K113869-SALK_000947C-R210
GenBank Accession LN485665 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>57-K113869-SALK_000947C-R210
TGAGATGAATTGGCCTGGACAATGGGAGTTATTCACGATGAATTCTGGTGTTTCAGCCAT
GCACGCAATTTTGATGCCTTTGATCAATAAAGTTCAGTTTTACGACGCAACCATTTGGAG
AATTTCACAAATCAAATTGCCTCCAGGCGTACCTTGCCATGTTTTTGACGCCAAAAAAAA
TAAAGTTGATTGTTGGGCTCACTCTGTCCTCGTCGATATTAACACCGGAGACATCAAGCC
TCTTGCGGTAACAAAATTACTAATTATTACTCCCTCCGTTCCTTTTTTATATAACGTTTT
AGTTAAAATCACGCAGATTAAGAAATTACAAATATAATTCATTTTACACATTAGTAATTG
TTGATCTGATGGATTTAATGGAAACATGACAGCTTACAACAACCACATGG

Last Updated on 06.12.2018 16:11