Sequences from confirmation amplicon


Confirmation sequences for line SALK_003454c and hit At1g29640 are shown.
Line ID SALK_003454c
Locus At1g29640 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:10356041
Primers used for PCR 17ux - LBb3, show primer details
   
Sequence Name 14-K117668-SALK_003454C-R210
GenBank Accession LN484680 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>14-K117668-SALK_003454C-R210
CACAATATATCCTGTACAACGGAAAACGCCATTTGACCTCCTTCCATCCTCCGTCCAACT
ATCAAATGCGGCGGAATCATTTTCCTTCCTCCGTCGTCATCGGAATATTCCTCCTCCGTC
GAATACCTCCTCATCGGTATGTTAACCGGAAGCGAACTAGAAAACGCCGTCACCGCTGAA
GGCAACGGCGTCGTTTTACTCCGTCTAGATGACTTGTTCCACACTCTCTCAGAATTTTCC
CGGAAATCCACCGGACGGTTATTCTCTTTCTCGTTACCGTCTTCTCGCCGGCGAATCGGA
AAGTAATTGTCAGAGAAAATGATCTCAGATTCGTCGAATTCTTCCGACATTTTCAAGAAA
ACAAATGTTTTTAAAGATGAAACTAAAAAAGGGATTAATAAAGTTAGGGTTTATGAAGAA
TTAAGATTAGAATTGGATTGGAGAAAACAGTAAGAAGAAGAAGAGAAATGTGAAGGGTTT
ATATAGAATAGAGGAAACGTAGAGAGTACTCAAGTTTTTTTTTTGGGGGGGGG
   
Sequence Name 51-K117669-SALK_003454C-17ux
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer gene specific primer, 17ux: 5'-CATCATCACATAACCACACACAAA-3'
Sequence (A. th genome BLAST matches underlined)
>51-K117669-SALK_003454C-17ux
CCCTCCACTTTTCCCTCCTCCTCCTAACGGTTTCCCCCAACCCAATTCAAACCTAAATTC
TCCAAAACCCCAAACTTTATAAACCCCTTTTTAAGTTCCACCTTAAAAAACATTGGTTTC
CTGGAAAAGGCCGAAAAAATCCAACAAACCGAAAACCATTTCCCCGGACAATAACTTCCC
AATCCCCCGGCAAAAAAACGGTACCAAAAAAAAAAATACCCGCCCGGGGGATTCCCGGGA
AAATTCGGAAAGAGGGGGGAACAAGCCTCCTAAACGGAGTAAAACAACCCCTTTCCCTTC
ACCGGGGACGGCTTTTCCAAGTCCCCTCCCGGTTAACATCCCGATAAGGAGGTATCCACC
GGAGGAGGAATTTCCCAATGACAACGGAGGAGGGAAAAGGATCCCCCCCCATTTAATATT
TGAACGGAGGAGGAAAGGAGGCCAAAGGGCGTTTCCCGTTGGTACGGGATATATGGGGGG
GAAACCAAATGGACCCTAAAACAACTAAATACCACATTGCGAACGTTTTAAAGGAACGGG
GGGGGTTTTCCTTTCCACCAGGGAGACGGGCAACAGCTGATGGCC

Last Updated on 06.12.2018 16:11