Sequences from confirmation amplicon


Confirmation sequences for line SALK_004298c and hit At5g47770 are shown.
Line ID SALK_004298c
Locus At5g47770 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:19345797
Primers used for PCR 12ck - LBb3, show primer details
   
Sequence Name 27-K108444-SALK_004298C-12ck
GenBank Accession LN485055 [GenBank]
Sequencing primer gene specific primer, 12ck: 5'-TTGAAGTTACTGGAGGAGAGAAGC-3'
Sequence (A. th genome BLAST matches underlined)
>27-K108444-SALK_004298C-12ck
GAATTGATCCTCTGGCTAAGCACAATTGGCACGTCCCCTATAATACCGATTCCATCGAAA
GAGGCCACATTGTGATTGGTCAGCCCAATTACGAAGGCCTATTTTACTAATGTTGAAGCA
CATGTTGTACTATAAAAAAACAGAGTTTATTATCTGTTTCTTTGGCTTGACATGACAAAT
GTACAACTGGGAGAGAAAGTCAGTCCGATTGTGTTGGGGATGACGATGGCAAAAGTAGTA
AATAAGGAAGAAACAGGAGGGGCGTTTTCGGGAGAAGAAGGACGAATATGAGTGTGAGTT
G
   
Sequence Name 11-K108443-SALK_004298C-R210
GenBank Accession LN484575 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>11-K108443-SALK_004298C-R210
GTCATTTGTTTCCCACAATATATCCTGCTCAGTCAATCATTGCCTTGCTTCCCATTTAAG
GACTGTCAACAACAGAGAGACCCCGATTGAGTTCCCTTGGAGAAGAAGAAGTAAGTGTGA
GAAAAAAAAAGGAGATCGATGAAAAGCGAGAGAGAGAGAGAGAAAGAGGCTGTTGTAGAC
AAGTCTGACCTCCACGTACATTGTAGTCCAGCATCTGCAAAGAAAGAGAGAATCAGCCAG
CATTCGAAGGATATATATGTGGGATCTGACTGATGAGAGAGAGATACCCGATCACCCCAG
AGACGAGATTCATTGGTGAATTCGAAGGAAGGGTCATGAAGAAGGTCAGACTTGAGAACA
GAATAAACGTTGAGAAAGGTTGACTTGAGATCGGTCTCCATTGAAGAGCTTTGGATACGA
CGACGATAGAGACTCCCACCAAGACTTCTCAGATGCAAATGATGTGAAGGTATTGCCTTT
TTTATTGTCTTGCCCAGATTCCTACAACAACAACTCACACTCATATTCCTCCTTCTTCTC
CCGAAAACGCCCCTCCTGTTTCTTCCTTATTTACTACTTTTGCCATCGTCATCCCCAACA
CAATCGGACTGACTTTCTCTCCCAGTTGTACATTTGTCATGTCACGCCAAAGAAACAGAT
AACACACTCTGTTTTTTTATAGTACAACATGCGCTTCA

Last Updated on 06.12.2018 16:11