Sequences from confirmation amplicon


Confirmation sequences for line SALK_016341 and hit At2g43500 are shown.
Line ID SALK_016341
Locus At2g43500 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:18063592
Primers used for PCR 23ux - LBb3, show primer details
   
Sequence Name 19-K117668-SALK_016341C-R210
GenBank Accession LN484831 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>19-K117668-SALK_016341C-R210
CATTTGTTACACCACAACAGATGTCCCGAAAAACCACCCCAGGATGGTTATTGTGGTGTA
AGCGTCCGAGATGTCAATTTGTTCATGACAACAGGATTATCTTGATCCATGACAGCACAA
CAAGATGTCCCAGAAGCTTCAAGGATAGGTATTGCAATGGAACCACGGACTTCATTGTCA
ATTGCATGCTTCATGCGCAAATACTCATCGGTCTTGTAATACATAACGTTTGATGTCCAT
TCAGGTACTCCCGAGATAAAGACTCGGCCAGGAAGACCCGGAAAAGAACATTGATTTGCT
TCAGCAGCAAACGTAAATCTCCTTGACACTTCACGGTACTGAGAAAACCTCGGATCAAGC
AAATAGGCCTGATCACAAGTACTGAGCAAGTACTGATCTCCTGTCTTGATAGGGGTCCAA
ACTTGCGCTAAAATGCCCTCACCTGAACCTGAGGACTCCATAAATAAGCTTAATGCCTTA
AGCATCTTCTCATCTAATGAGTGGCTCAAAGACCTGGGAATAGTACAGTTGAGTACGTTA
GGAAAACCAATCTTCTGATTAACAACCTTGCGTCGTTTACCACTTAACTCATCGCTATCT
GAAGAGCGATGAAACTGAAAATTCATTT
   
Sequence Name 56-K117669-SALK_016341C-23ux
GenBank Accession LN485648 [GenBank]
Sequencing primer gene specific primer, 23ux: 5'-AAATGAATTCTCAGTTTCATCGCT-3'
Sequence (A. th genome BLAST matches underlined)
>56-K117669-SALK_016341C-23ux
ACGACGCAGGGTTGTTATCAGAAGATTGGTTTTCCTAACGTACTCAACTGTACTATTCCC
AGGTCTTTGAGCCACTCATTAGATGAGAAGATGCTTAAGGCATTAAGCTTATTTATGGAG
TCCTCAGGTTCAGGTGAGGGCATTTTAGCGCAAGTTTGGACCCCTATCAAGACAGGAGAT
CAGTACTTGCTCAGTACTTGTGATCAGGCCTATTTGCTTGATCCGAGGTTTTCTCAGTAC
CGTGAAGTGTCAAGGAGATTTACGTTTGCTGCTGAAGCAAATCAATGTTCTTTTCCGGGT
CTTCCTGGCCGAGTCTTTATCTCGGGAGTACCTGAATGGACATCAAACGTTATGTATTAC
AAGACCGATGAGTATTTGCGCATGAAGCATGCAATTGACAATGAAGTCCGTGGTTCCATT
GCAATACCTATCCTTGAAGCTTCTGGGACATCTTGTTGTGCTGTCATGGATCAAGATAAT
CCTGTTGTCATGAACAAATTGACATCTCGGACGCTTACACCACAATAACCATCCTGGGGT
GGTTTTTCTGGGACATCTTGTTGTGGTGTAAACAAATTGACGCTTAGACAACTTAATAAC
ACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAA
CAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGT
TTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCG

Last Updated on 06.12.2018 16:11