Sequences from confirmation amplicon


Confirmation sequences for line SALK_017887 and hit At4g24330 are shown.
Line ID SALK_017887
Locus At4g24330 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:12605535
Primers used for PCR 49dh - LBb3, show primer details
   
Sequence Name 55-K110195-SALK_017887C-49dh
GenBank Accession LN485621 [GenBank]
Sequencing primer gene specific primer, 49dh: 5'-AAGACGACGATGTTTCAGAAGATT-3'
Sequence (A. th genome BLAST matches underlined)
>55-K110195-SALK_017887C-49dh
CGTCCCCTCTTTGACTCGTCTGAGTCACGGTTCTGGATCTGGACCCATCTCCCGATTCTG
ATTCTACTCCTGCATCTAAATCTGATCCTCCCACTCAGACCGTGAAGCCTTCGTCCTCCA
TCTCCTTCGATTACTGGGATGAAGATGAGTTCGAAGGATTGCCGGAGGACGAGAAATCTA
CGGAGTCTCCGGTTTTTTCCGATGACGCCTCCTCTCCTGCCGATCCACAGACGCCGGATC
TTGAGTCTGCTTCAGAAACTCCAGATACTGACATTCCGAAGAAGATGCAATCGTACACTG
TGGAGATCGTTTGCGTCTCTATATTGATTGGTTACGCTATCAATTACTTCACTGGTAAAC
GTGAAAATGAGAACCTCGCTTTGGCTTGGGCTTCCAAATTTGGTCTTAAAGATACGATTT
TTGAGAAGAACTTCAGTTTGCTTGGAGTTGGTGAAGGAGAAGACTCTCCTTTGTTGCTGA
AAGAAGCGACGAATGTGTTTAAGTTCTATGCCAGTGGGCGTAGGTATTGCCATGGGCTAA
ACCTAATAACACATTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTA
CTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCT
GGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCT
GTTTGATGGTGGTTCCG
   
Sequence Name 47-K110194-SALK_017887C-R210
GenBank Accession LN485433 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>47-K110194-SALK_017887C-R210
GGTTTAGCCCATGGCAATACCTACGCCCACTGGCATAGAACTTAAACACATTCGTCGCTT
CTTTCAGCAACAAAGGAGAGTCTTCTCCTTCACCAACTCCAAGCAAACTGAAGTTCTTCT
CAAAAATCGTATCTTTAAGACCAAATTTGGAAGCCCAAGCCAAAGCGAGGTTCTCATTTT
CACGTTTACCAGTGAAGTAATTGATAGCGTAACCAATCAATATAGAGACGCAAACGATCT
CCACAGTGTACGATTGCATCTTCTTCGGAATGTCAGTATCTGGAGTTTCTGAAGCAGACT
CAAGATCCGGCGTCTGTGGATCGGCAGGAGAGGAGGCGTCATCGGAAAAAACCGGAGACT
CCGTAGATTTCTCGTCCTCCGGCAATCCTTCGAACTCATCTTCATCCCAGTAATCGAAGG
AGATGGAGGACGAAGGCTTCACGGTCTGAGTGGGAGGATCAGATTTAGATGCAGGAGTAG
AATCAGAATCGGGAGATGGGTCCAGATCCAGAACCGTTGACTCAGACTGAGTCAGAAGAG
GAGGACGGAGAGAGTGGTGAAGCTCAGTGGAATCTTCTGAAA

Last Updated on 06.12.2018 16:11