Sequences from confirmation amplicon


Confirmation sequences for line SALK_019407 and hit At4g16420 are shown.
Line ID SALK_019407
Locus At4g16420 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:9264026
Primers used for PCR 08gq - LBb3, show primer details
   
Sequence Name 22-K112129-SALK_019407C-08gq
GenBank Accession LN484915 [GenBank]
Sequencing primer gene specific primer, 08gq: 5'-TCTCAGTTCTCAGACACTTACGGA-3'
Sequence (A. th genome BLAST matches underlined)
>22-K112129-SALK_019407C-08gq
ATCAGTCCAATCATTCACATAGCTTGAAGAAGCTTGCACAGGTGGTCTAGAGCCCATCTC
CCCTGCAATTTGACCAAATTGACCGCTCTCTTTCCCTCTGTTCATCCCTTCTTCGTTTTC
TCTCTTCCTCTTCCTTCCCAGATACCTCTCTGCTTCAGCCGTTGAACGACACCCTGCCAC
TTGAGCTTCCTGCTCCACCAATCCAACACAGTGAGCCACATCCAATCCAAGAAACCAAAC
GCACAGTTTGAGGGTAGCAATGTCCTTACCTTGAGATCTTTGAGCCGTTTCACCATGCGG
TACTCGCTTACAACATTACGGAGTAGCTCGTCGTGCTCCTCTTTTGAATGAAAACGCATA
AAAACGTCCAAACGTCGGCATTGTACTTTCTCCTCCTGAGACAGGTCCTTCTCAAAGGGA
TTTGGGTACAACAGGTTTCTTTCTATTATGAATTCTTTTCTACGTTTCCTCTCATCAAGC
CTACAAACATCATACTCACCTGCGTCAGAATGGACAGCAAAAAGAAGAGACTTTGTTCCC
CTTTTGATCTTAAATGTTGTACCTTTTTGAATAGATACGCAACACACGCAGCTTCAGTTC
ATGTTCTTCAGGAGTATCGTTCTCTTTGAACTCCATCTCCGCCAAGAGTTGCTCAGCATC
ATTGTCATATTCAGGGTCAAACTCTTCTCTTTTCTGGTTGTAATTACTCAGCTCAACCAA
AGAGTTGTTTACCGAGGTGGAAACAGGTTTCTTCCCTCCAAAACTTCTGTCTACAAAAGA
CTCTAACCACAAAGAATGTCAAAACATAGAAAAAGGGAGAAAATATCTACCAGTATAAAT
ACAATGACAAATATTGGGCCTTTTTGGATTTTAAAATTATGCTCAGTCAGCTTCTTACTT
TACAAGTTACCCTATATCAGGATATATTGTGGTGTAAACAAATTGACGCTTAGACAACTT
AATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGAC
GGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCAC
GCTGGGTTTGCCCAGCAGGCGAAAATCCTGTTTG
   
Sequence Name 06-K112128-SALK_019407C-R210
GenBank Accession LN484430 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>06-K112128-SALK_019407C-R210
TTTGTTTCCCACAATATATCCTGATATAGGGTAACTTGTAAAGTAAGAAGCTGACTGAGC
ATAATTTTAAAATCCAAAAAGGCCCAATATTTGTCATTGTATTTATACTGGTAGATATTT
TCTCCCTTTTTCTATGTTTTGACATTCTTTGTGGTTAGAGTCTTTTGTAGACAGAAGTTT
TGGAGGGAAGAAACCTGTTTCCACCTCGGTAAACAACTCTTTGGTTGAGCTGAGTAATTA
CAACCAGAAAAGAGAAGAGTTTGACCCTGAATATGACAATGATGCTGAGCAACTCTTGGC
GGAGATGGAGTTCAAAGAGAACGATACTCCTGAAGAACATGAACTGAAGCTGCGTGTGTT
GCGTATCTATTCAAAAAGGTACAACATTTAAGATCAAAAGGGGAACAAAGTCTCTTCTTT
TTGCTGTCCATTCTGACGCAGGTGAGTATGATGTTTGTAGGCTTGATGAGAGGAAACGTA
GAAAAGAATTCATAATAGAAAGAAACCTGTTGTACCCAAATCCCTTTGAGAAGGACCTGT
CTCAGGAGGAGAAAGTACAATGCCGACGTTTGGACGTTTTTATGCGTTTTCATTCAAAAG
AGGAGCACGACGAGCTACTCCGTAATGTTGTAAGCGAGTACCGCATGGTGAAACGGCTCA
AAGATCTCAAGGTAAGGACATTGCTACCCTCAAACTGTGCGTTTGGTTTCTTGGATTGGA
TGTGGCTCACTGTGTTGGATTGGTGGAGCAGGAAGCTCAAGTGGCAGGGTGTCGTTCAAC
GGCTGAAGCAGAGAGGTATCTGGGAAGGAAGAGGAAGAGAGAAAACGAAGAAGGGATGAA
CAGAGGGAAAGAGAGCGGTCAATTTGGTCAAATTGCAGGGGAGATGGGCTCTAGACCACC
TGTGCAAGCTTCTTCAAGCTATGTGAATGATTTGGACTTGATTGGGTTCACGGAGTCGCA
ACTGCTGTCTGAAATCGGTAAGTGT

Last Updated on 06.12.2018 16:11