Sequences from confirmation amplicon


Confirmation sequences for line SALK_024488c and hit At5g01650 are shown.
Line ID SALK_024488c
Locus At5g01650 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:243851
Primers used for PCR 30um - LBb3, show primer details
   
Sequence Name 06-K117319-SALK_024488C-30um
GenBank Accession LN484440 [GenBank]
Sequencing primer gene specific primer, 30um: 5'-GATGGTCCTAGAGAGACAACGAAC-3'
Sequence (A. th genome BLAST matches underlined)
>06-K117319-SALK_024488C-30um
CGGGCATTGAATCATTACACATTTGCATATGTTATGTCACTACATCAAAAAAGTTATCAG
AGAGAGGGAATTGCTTGCCTTGGTGTCATAAAACTTGAGGAAGAATCGAGACTTGGGCAC
CGATAGCTTAGTCTCAAGAATGGCGGAAACAGCAGCGCTTAGCTTCTTGTTCACATCCGC
ATTAAGGCCACCGATAGAAACTAATTCACCATAAGCTGCAGGATCCTCGGTCCCGCCAAA
TGACATAGGCACTGAGCCTTTCAAGACAATCATCACATACTGCAAATTACCACAATGAAC
AATGCAATCAGATAATGATCTAAGAAACAACATTACAGGACAAAAATATTTAAACATCAC
TAACATAAACAAGCAATCGTCAAAGCAGACCAATATTGTTTTTGAAAACAAACTTCAGCA
ATGAGAAATTCAAGGGCCAGGAATGGCCTAGAAATCGTGGTAAAATAAAAAAGAAGAACC
CCAACGAAGATTGTACAAATAAGTCAAGAGAAGACTCCGGAAATGTGAACCACTAGAATA
GAACGGAGCAACGAGATAAAATTGCTTAGGGTTTCTATATCATGCATGTGAAGAAAACAA
CACTCGAATCGCTGTTATTCAATAAGGAGAAGAAAATGATTAAGAGATAAAGACGCACAC
AAGGCAAATCTCAGGAGAAAACAAATTGCGGACAAATTGACGCTTAGACAACTTAATAAC
ACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAA
CAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGT
TTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCG
   
Sequence Name 22-K117318-SALK_024488C-R210
GenBank Accession LN484926 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>22-K117318-SALK_024488C-R210
TGTCCGCATTTGTTTTCTCCTGAGATTTGCCTTGTGTGCGTCTTTATCTCTTAATCATTT
TCTTCTCCTTATTGAATAACAGCGATTCGAGTGTTGTTTTCTTCACATGCATGATATAGA
AACCCTAAGCAATTTTATCTCGTTGCTCCGTTCTATTCTAGTGGTTCACATTTCCGGAGT
CTTCTCTTGACTTATTTGTACAATCTTCGTTGGGGTTCTTCTTTTTTATTTTACCACGAT
TTCTAGGCCATTCCTGGCCCTTGAATTTCTCATTGCTGAAGTTTGTTTTCAAAAACAATA
TTGGTCTGCTTTGACGATTGCTTGTTTATGTTAGTGATGTTTAAATATTTTTGTCCTGTA
ATGTTGTTTCTTAGATCATTATCTGATTGCATTGTTCATTGTGGTAATTTGCAGTATGTG
ATGATTGTCTTGAAAGGCTCAGTGCCTATGTCATTTGGCGGGACCGAGGATCCTGCAGCT
TATGGTGAATTAGTTTCTATCGGTGGCCTTAATGCGGATGTGAACAAGAAGCTAAGCGCT
GCTGTTTCCGCCATTCTTGAGACTAAGCTATCGGTGCCCAAGTCTCGATTCTTCCTCAAG
TTTTATGACACCAAGGCAAGCAATTCCCTCTCTCTGATAACTTTTTTGATGTAGTGACAT
AACATATGCAAATGTGTTAATGATTTCATATGCCCGATATGCGTCCATGTCTCATTTTCA
TTGTTCGTTGTCTCTCAGGGGACCATC

Last Updated on 06.12.2018 16:11