Sequences from confirmation amplicon


Confirmation sequences for line SALK_029663 and hit At4g10040 are shown.
Line ID SALK_029663
Locus At4g10040 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:6278196
Primers used for PCR CE10 - R212, show primer details
   
Sequence Name 50-K107002-SALK_029663C-R214
GenBank Accession LN485494 [GenBank]
Sequencing primer gene specific primer, R214: 5'-AACGTTGCGGTTCTGTCAGTTCC-3'
Sequence (A. th genome BLAST matches underlined)
>50-K107002-SALK_029663C-R214
GGCGGGGGTCATAACGTGACTCCCTTAATTCTCCGCTCATGATCAGATTGTCGTTTCCCG
CCTTCAGTTTAAACTATCAGTGTTTAAACTGTAACAAGCAAAGAAATTCCACACCAATTC
AATCAAATTGTGATCTTATCTCTTCATAATTGCTCAAAAAGAAACAAGCGACCCAAAAGT
GTGAAGAAAGGAGTCAGTATTAGCCAAACAGCATTTTCTTGACAGACAATATTATGTTTC
GATATTCTAGAATATGCAATATAATAAATTGGAACACTGTTGAGATGATGATGCACACAC
AGGTTATGATGCACCAGCTTAAAGAGTGAAAGATGAATCATAAGATTTGTGGAAAATTCC
ACAAATCAGCTCAATAAAGAGACAATAGACAAGAGTGAAGGAAAGACTCAAGTATTAACC
AAAACAAATGTTGCTAATTGCTTGATATTCTTGAACATGCAATAGAAAACAAATGGCACA
ACATTGAGATGTTGCACTTATTAGTGTACCATTTTGAAAGATGATGTCCAATTTCACAAA
TATGG
   
Sequence Name 58-K107003-SALK_029663C-CE10
GenBank Accession LN485679 [GenBank]
Sequencing primer gene specific primer, CE10: 5'-CCATATTTGTGAAATTGGACATCA-3'
Sequence (A. th genome BLAST matches underlined)
>58-K107003-SALK_029663C-CE10
GTTGTGCCATTTGTTTTCTATTGCATGTTCAAGAATATCAAGCAATTAGCAACATTTGTT
TTGGTTAATACTTGAGTCTTTCCTTCACTCTTGTCTATTGTCTCTTTATTGAGCTGATTT
GTGGAATTTTCCACAAATCTTATGATTCATCTTTCACTCTTTAAGCTGGTGCATCATAAC
CTGTGTGTGCATCATCATCTCAACAGTGTTCCAATTTATTATATTGCATATTCTAGAATA
TCGAAACATAATATTGTCTGTCAAGAAAATGCTGTTTGGCTAATACTGACTCCTTTCTTC
ACACTTTTGGGTCGCTTGTTTCTTTTTGAGCAATTATGAAGAGATAAGATCACAATTTGA
TTGAATTGGTGTGGAATTTCTTTGCTTGTTACAGTTTAAACACTGATAGTTTAAACTGAA
GGCGGGAAACGACAATCTGATCATGAGCGGAGAATTAAGGGAGTCACGTTATGACCCCCG
CCGATGACGCGGGACAAGCCGTTTTACGTTTGGAACTGACAGAACCGCAACGTTGAAGGA
GCCACTCAGCCGCGGGTTTCTGGAGTTTAATGAGCTAAGCACATACGTCAGAAACCATTA
TTGCGCGTTCAAAAGTCGCCTAAGG
Primers used for PCR CE09 - R204, show primer details
   
Sequence Name 51-K107002-SALK_029663C-R210
GenBank Accession LN485523 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>51-K107002-SALK_029663C-R210
GCGTCATTTGTTTACCACAATATATCCTGCTGGAACAAAAATGGTGTTTCCTGGACTGAA
AAAACCGCAAGATCGTGCCGATCTCATCGCTTATTTGAAGGAAGGTACTGCTTAGACAGG
CTCGTCCAGATATATGAAGCTGGCATTTTTTTTTCTCACAGCTAAATAAAATCAGACCAA
AAATATTATGGTCATGAACTGCTTTTTGTATGGTCTTTTATTCTTTCTTTCTTTTTACGT
TGTTGAAGAGGCTAGTTGCCTCTTATAAAGTGGAATATTCGTTATTGATGTGAAGAGCTA
AGAACCAATTTCCACCACGATAGTCATGAGATTTTCCTAATTCAACTTGCCTACTTTTGT
TACGAGTTTAGAATCTTTTTTTCAGTTGTTCATTTTCATTTCAATAATTAGACAAATACG
TAAGAGATGCGCATA
   
Sequence Name 59-K107003-SALK_029663C-CE09
GenBank Accession LN485706 [GenBank]
Sequencing primer gene specific primer, CE09: 5'-TTATGCGCATCTCTTACGTATTTG-3'
Sequence (A. th genome BLAST matches underlined)
>59-K107003-SALK_029663C-CE09
GGCACAGCTGATTGCCCTTCACCGGCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGC
AAGGAAATTGGTTCTTAGCTCTTCACATCAATAACGAATATTCCACTTTATAAGAGGCAA
CTAGCCTCTTCAACAACGTAAAAAGAAAGAAAGAATAAAAGACCATACAAAAAGCAGTTC
ATGACCATAATATTTTTGGTCTGATTTTATTTAGCTGTGAGAAAAAAAAATGCCAGCTTC
ATATATCTGGACGAGCCTGTCTAAGCAGTACCTTCCTTCAAATAAGCGATGAGATCGGCA
CGATCTTGCGGTTTTTTCAGTCCAGGAAACACCATTTTTGTTCCAGCAGGATATATTGTG
GTGTAAACAAATTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTACT
GGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGG
CCCTGAGAGAGTTGCAGCAAGCGGTCCAC

Last Updated on 06.12.2018 16:11