Sequences from confirmation amplicon


Confirmation sequences for line SALK_031682c and hit At5g20580 are shown.
Line ID SALK_031682c
Locus At5g20580 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:6958807
Primers used for PCR 49dl - LBb3, show primer details
   
Sequence Name 87-K110041-SALK_031682C-49dl
GenBank Accession LN486305 [GenBank]
Sequencing primer gene specific primer, 49dl: 5'-AAATGAAAATTGTGTGTCTTGCAG-3'
Sequence (A. th genome BLAST matches underlined)
>87-K110041-SALK_031682C-49dl
TCTCGCTCGATCTCTGATCTCTGAGAGAGATAGAGAGATACAACACGCTCCGGAATACCA
ATAATCAGGTTCGAGTCTATCTATAAACATAAGAACATATGAGAACAAAACATACTTTCA
CAGCATCACATCATGTTTATCATCAACACAGCTTTACCATGAATTGTTTTTGCATCAAAC
AATTTGCAAGGGCTACACATTTTTTCTGATCCCTGAACTCATCATCTTTTGTTTTTGAAA
CTCCTGAAACAGTATGTAGCAGAAAATGAAAGGTTAAGAGCTATTCTTGGAGAATGGAGT
ATGCGAGCTGCAAAGGTACAATCTTCTCTTCTCTCTCTCTCTCTTCATTGTATGTTTTAG
AGATGCAGCAATATGATAGTGAAAAATCTTAAGCCAATATCGAGTTTATCGAATTCAAAC
CCTTTTGTTTACTATGAGAGGCTAAACCAAAACCAACGGATTGTGTAGCTTGAACGAGCT
CTGGAGGTGGAGAGAATATCAAATATTGAACTGCGGAAGAAAGTTTCAGCTCTCAGAGAC
CCCAGGATATATTGTGGTGTAAACAAATTGACGCTTAGACAACTTAATAACACATTGCGG
ACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATT
GCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAG
CAAGCGAAAATCCTGTTTGATGGTGGT
   
Sequence Name 80-K110040-SALK_031682C-R210
GenBank Accession LN486218 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>80-K110040-SALK_031682C-R210
CGTCACTTTGTTTACACCACAATATATCCTGGGGGTCTCTGAGAGCTGAAACTTTCTTCC
GCAGTTCAATATTTGATATTCTCTCCACCTCCAGAGCTCGTTCAAGCTACACAATCCGTT
GGTTTTGGTTTAGCCTCTCATAGTAAACAAAAGGGTTTGAATTCGATAAACTCGATATTG
GCTTAAGATTTTTCACTATCATATTGCTGCATCTCTAAAACATACAATGAAGAGAGAGAG
AGAGAAGAGAAGATTGTACCTTTGCAGCTCGCATACTCCATTCTCCAAGAATAGCTCTTA
ACCTTTCATTTTCTGCTACATACTGTTTCAGGAGTTTCAAAAACAAAAGATGATGAGTTC
AGGGATCAGAAAAAATGTGTAGCCCTTGCAAATTGTTTGATGCAAAAACAATTCATGGTA
AAGCTGTGTTGATGATAAACATGATGTGATGCTGTGAAAGTATGTTTTGTTCTCATATGT
TCTTATGTTTATAGATAGACTCGAACCTGATTATTGGTATTCCGGACGTGTTGTATCTCT
CTATCTCTCTCAGAGATCAGAGATCGAGCGAGATTAAGCTCTGAATGGAGTTGATCCACC
TGCAAGACACACATTTTTCA

Last Updated on 06.12.2018 16:11