Sequences from confirmation amplicon


Confirmation sequences for line SALK_042719c and hit At2g27070 are shown.
Line ID SALK_042719c
Locus At2g27070 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:11560136
Primers used for PCR 17ty - LBb3, show primer details
   
Sequence Name 29-K117180-SALK_042719C-17ty
GenBank Accession LN485114 [GenBank]
Sequencing primer gene specific primer, 17ty: 5'-ATGTCGTATGCAAACACGATCTAC-3'
Sequence (A. th genome BLAST matches underlined)
>29-K117180-SALK_042719C-17ty
TTTTCTAAAAAACTATTGTTCAACAATCTCTTNAAAAATNTACATAGTATAAAGTATGGT
TTGACAAAAAATAAAAAGAAACTTTACATATAGCATATTGGTTAAAACAAATTATCAATC
AAACTATCGTTTCAATGTCATCAAAATATGAATACCTCAACTGAAAATTGTAGATGTGTA
CATGTAAACGGAATTCAAATCCTGATTATTTAGAAGAATAATTTTTAAATTTCAACAAAA
TATATAGAACATCTTTAAATTTCTCGATTCAAGTTTTGTTTTTAAATCAGCTAGTTGTTT
CTCCAAAATTTGTATTTCATGCTAAAAATAATAGAAATAAAAATCTAAATGAAATCACAA
ACAAAAAATCAATAACATATTATATATGATAATAAGATTTTACCTCTGTATTTGGACTTT
TCAAGCATGCGTGACCAAATATCAAGGATATATTGTGGTGTAAACAAATTGACGCTTAGA
CAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAG
TGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCG
GTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTC
   
Sequence Name 08-K117179-SALK_042719C-R210
GenBank Accession LN484502 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>08-K117179-SALK_042719C-R210
GTTTACCCACAATATATCCTTGATATTTGGTCACGCATGCTTGAAAAGTCCAAATACAGA
GGTAAAATCTTATTATCATATATAATATGTTATTGATTTTTTGTTTGTGATTTCATTTAG
ATTTTTATTTCTATTATTTTTAGCATGAAATACAAATTTTGGAGAAACAACTAGCTGATT
TAAAAACAAAACTTGAATCGAGAAATTTAAAGATGTTCTATATATTTTGTTGAAATTTAA
AAATTATTCTTCTAAATAATCAGGATTTGAATTCCGTTTACATGTACACATCTACAATTT
TCAGTTGAGGTATTCATATTTTGATGACATTGAAACGATAGTTTGATTGATAATTTGTTT
TAACCAATATGCTATATGTAAAGTTTCTTTTTATTTTTTGTCAAACCATACTTTATACTA
TGTAATTTTTAAAAGAGATTGTTGAACAATAGTTTATTTAGAAAATAGTAACATAGTGTT
GAATTAAAAAGAAATTATTTGTAGATCGTGTTTGCTTACGACATA

Last Updated on 06.12.2018 16:11