Sequences from confirmation amplicon


Confirmation sequences for line SALK_046054 and hit At1g01230 are shown.
Line ID SALK_046054
Locus At1g01230 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:98083
Primers used for PCR 11rr - LBb3, show primer details
   
Sequence Name 21-K116528-SALK_046054C-11rr
GenBank Accession LN484890 [GenBank]
Sequencing primer gene specific primer, 11rr: 5'-CTCATGTTGGTTTTATGTTCCCTT-3'
Sequence (A. th genome BLAST matches underlined)
>21-K116528-SALK_046054C-11rr
AAATGAAACGCAGACGTTTTGGTTTGGGTAATGTCAAAAATATCCCAATAATTAATTAAT
GCCCAGTGTAGATGCAAAAAAGCAGTCGTCGTCTTTCACGGGCACACAAAATTAAACCAA
AGAAACAAACAATCCTTGTTCTCGCCGAAATAGAGAATTTTGTGAATCTGGGTTTTTAGT
TCAGGTGTTAATATAAGATTTTGATCAAAAGAAGACGAGATTCGATCCGATCCGATCTGA
TTGAAGAAGAAATGGCGAATCTGTATGTGAAAGCGGTTCCACCACCGGATATGAATAGGA
ATACGGAATGGTTCATGTATCCAGGAGTTTGGACGACTTACATGCTTATTCTCTTCTTCG
GTTGGCTCGTTGTTCTCTCTGTCTCTGGTTGTTCCCCTGGAATGGCTTGGACTGTTGTTA
ATCTCGCTCACTTCGTTGTAAGTCTTCGATTGTGTTTATGCTTTAGAGATGATTTTTTCA
CTTAGGGTTGTGACTTTAAATTAGATGATGGATTGATTCCTTGTTTTTTTTTTATTTCCT
GAAATCTGGATGTGAATCTGGCTCTAGTGTTTGAATTGATCTCTTTGGTTATTAGCAATT
TTTTAGTTGGTTTAGGGTTCGAATGAAAAGGCAATTACCTTCTGATTGATCAGTTTTAGC
TATCGTATATCGTTGAGCTTGGATCAGGCTTCGAATTAGGATACAGTTACCTTCTTATCA
ATGAATTGACGCTTAAACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTG
GTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCGGGCCCTGA
GAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGA
   
Sequence Name 13-K116527-SALK_046054C-R210
GenBank Accession LN484649 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>13-K116527-SALK_046054C-R210
AGAAGGTAACTGTATCCTAATTCGAAGCCTGATCCAAGCTCAACGATATACGATAGCTAA
AACTGATCAATCAGAAGGTAATTGCCTCTTCATTCGAACCCTAAACCAACTAAAAAATTG
CTAATAACCAAAGAGATCAATTCAAACACTAGAGCCAGATTCACATCCAGATCTCAGGAA
ATAAAAAAAAAACAAGGAATCAATCCATCATCTAATTTAAAGTCACAACCCTAAGTGAAA
AAATCATCTCTAAAGCATAAACACAATCGAAGACTTACAACGAAGTGAGCGAGATTAACA
ACAGTCCAAGCCATTCCGGGGGAACAACCAGAGACAGAGAGAACAACGAGCCAACCGAAG
AAGAGAATAAGCATGTAAGTCGTCCAAACTCCTGGATACATGAACCATTCCGTATTCCTA
TTCATATCCGGGGGTGGAACCGCTTTCACATACAGATTCGCCATTTCTTCTTCAATCAGA
TCGGATCGGATCGAATCTCGTCTTCTTTTGATCAAAATCTTATATTAACACCTGAACTAA
AAACCCAGATTCACAAAATTCTCTATTTCGGCGAGAACAAGGATGGTTTGTTTCTTTGGT
TTAATTTTGTGTGCCCGTGAAAGACGACAACGGCTTTTTTGCATCTACACTGGGCATTAA
TTAATTATTGGGATATTTTTGACATTACCCAAACCAAAACGTCTGCGTTTTCATTTTGTA
CAGACAGAAAATAGGCCAACAAATGCAATAAAGGGAACATA

Last Updated on 06.12.2018 16:11