Sequences from confirmation amplicon


Confirmation sequences for line SALK_049398 and hit At3g10730 are shown.
Line ID SALK_049398
Locus At3g10730 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:3358484
Primers used for PCR 42vi - LBb3, show primer details
   
Sequence Name 47-K117945-SALK_049398C-42vi
GenBank Accession LN485443 [GenBank]
Sequencing primer gene specific primer, 42vi: 5'-GACAATATGCATTGAGGAGGATTT-3'
Sequence (A. th genome BLAST matches underlined)
>47-K117945-SALK_049398C-42vi
TAGCTTTGCAGTTCCTTTGTCTATATCAATGCCACTGTGTTGTTGTGCTTTGTTTGGGAC
ATCGTTGACAGAGAAAAGAACCGTATGTATGGGAAGAGCTTGTAAGTTTACAATTAGTGG
AACTGTATATATTCACTGTTTACGGATATCCTTAGGAAACAGTAGCTGAAGGGAAATAGT
CTCAAGAGTGTGTAATGTGATGGTCACACATTGCTTTCCATCATTGTTCATCCTTGTGAT
CATTTGTCTGATAAATTTCTTCTTGTCTGACCACTAAAAGGCAATACTAATCTTACGGTT
ATGTTATGCACCATTTAATCGAACAGGCTGTAGCATATGACAGATCGAGCGCCCCAAAGG
ATTGCCGTGTATCAGGATGGCTAGGTGACATAGATATGGAGACTGAGACAATGCCCCTTC
TTACAGAATTCAGTTACGACTTAGACAGGTCCAATGCACAGACATTCGACATTGCAGACT
CTGCTCACTCAGGACTTGTCAACACTGTCAGGCTAGACTTCAATTCCAACCATGGAAGCT
CTTCACACACTTGCATCTACCGCTTCAGGGTTCATGGCCGTGAACTAGACTCAGTCTCTG
TTGCTCATGCTTGATCTGAAAGTCCACGTCAAACTTTTCTTCTCTTTGTAACATTCCCTC
TAATAGATATCTCTCTTCTTTTTTTGGTGTATATATTGTGGTGTAAACAAATTGACGCTT
AGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCAC
CAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGNCA
GCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTT
   
Sequence Name 12-K117944-SALK_049398C-R210
GenBank Accession LN484626 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>12-K117944-SALK_049398C-R210
GTCATTTGTTTCACCACAATATATACACCAAAAAAAGAAGAGAGATATCTATTAGAGGGA
ATGTTACAAAGAGAAGAAAAGTTTGACGTGGACTTTCAGATCAAGCATGAGCAACAGAGA
CTGAGTCTAGTTCACGGCCATGAACCCTGAAGCGGTAGATGCAAGTGTGTGAAGAGCTTC
CATGGTTGGAATTGAAGTCTAGCCTGACAGTGTTGACAAGTCCTGAGTGAGCAGAGTCTG
CAATGTCGAATGTCTGTGCATTGGACCTGTCTAAGTCGTAACTGAATTCTGTAAGAAGGG
GCATTGTCTCAGTCTCCATATCTATGTCACCTAGCCATCCTGATACACGGCAATCCTTTG
GGGCGCTCGATCTGTCATATGCTACAGCCTGTTCGATTAAATGGTGCATAACATAACCGT
AAGATTAGTATTGCCTTTTAGTGGTCAGACAAGAAGAAATTTATCAGACAAATGATCACA
AGGATGAACAATGATGGAAAGCAATGTGTGACCATCACATTACACACTCTTGAGACTATT
TCCCTTCAGCTACTGTTTCCTAAGGATATCCGTAAACAGTGAATATTACAGTTCCACTAA
TTGTAAACTTACAAGCTCTTCCCATACATACGGTTCTTTTCTCTGTCAACGATGTCCCAA
ACAAAGCACAACAACACAGTGGCATTGATATTAGACAAAGGAACTGCTAAAGCTAGTGAT
TTGCAGAAAATAACAATAGGTAAAATCCTCCTCAT

Last Updated on 06.12.2018 16:11