Sequences from confirmation amplicon


Confirmation sequences for line SALK_057856c and hit At5g19310 are shown.
Line ID SALK_057856c
Locus At5g19310 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:6498808
Primers used for PCR 48fm - LBb3, show primer details
   
Sequence Name 63-K111812-SALK_057856C-48fm
GenBank Accession LN485821 [GenBank]
Sequencing primer gene specific primer, 48fm: 5'-TTTCCTGCAAATCTTCACCTCTAT-3'
Sequence (A. th genome BLAST matches underlined)
>63-K111812-SALK_057856C-48fm
GCATTCATCTCACAGGATAATTGGCTCCATAGGCTTTTTCAAAAATTACAAGCAGCATAG
TCAAACAGCAATCACCTTCAAGTTGAGATAATCGGTTGTGGATACGATTCTTATACCGAG
TTTCCTTTAACTCGGCTAGTCGAGAGCCTGATTCATAGTTTAGTCGCTGTTGCAAAAGTG
CATCTTCGAACTCGCTCATCAAATCACCTCTATTGGGAGTATAACTATTTCCCTGCAAAA
TCCAAGCATATAACTTCATCCAAAAATCACAAAAATCAATGAATTCGGATTCATCGAATT
CGAGAAGGAAACTCCAAGGAATTGGTTAGAGAAGGAGTTGAAGAAGCACAGAGCCAGAAA
ATTCGATTCACAACCACAAATCCTAACATGCAAATCGAAGAAACAGCTTACACGAAGAGG
CGGAGAAGGAGAGAGATCGGAGACGGAGGCATGGTAAATAGAAGAAACGGAAGCGTAAAG
GTGAGAAGGCAAGAGAAGGTCGCGAGAAAGGTAGTTAAGAGCAGAGATCAGAGACTTTGT
CTTCTCGACGGGATCGTTCTCCTCCTGCTCTTGTAGCTGCTTCACCATGGCGGGAGTTTC
TAATTAGATTATTTAATTTTCTGTTGCCGTTCCGTTTTTATTATTTTTGTTTTCTCCAAA
TCTCTCTATCGCTGTTGCTTTCGAGTAAACAAATTGACGCTNAGACAACTTAATAACACA
TTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAG
CTGATTGCCCTTCACCGCCGGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTG
CCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTT
   
Sequence Name 53-K111811-SALK_057856C-R210
GenBank Accession LN485581 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>53-K111811-SALK_057856C-R210
TTTGTTACTCGAAGCACAGCGATAGAGAGATTTGGAGAAAACAAAAATAATAAAAACGGA
ACGGCAACAGAAAATTAAATAATCTAATTAGAAACTCCCGCCATGGTGAAGCAGCTACAA
GAGCAGGAGGAGAACGATCCCGTCGAGAAGACAAAGTCTCTGATCTCTGCTCTTAACTAC
CTTTCTCGCGACCTTCTCTTGCCTTCTCACCTTTACGCTTCCGTTTCTTCTATTTACCAT
GCCTCCGTCTCCGATCTCTCTCCTTCTCCGCCTCTTCGTGTAAGCTGTTTCTTCGATTTG
CATGTTAGGATTTGTGGTTGTGAATCGAATTTTCTGGCTCTGTGCTTCTTCAACTCCTTC
TCTAACCAATTCCTTGGAGTTTCCTTCTCGAATTCGATGAATCCGAATTCATTGATTTTT
GTGATTTTTGGATGAAGTTATATGCTTGGATTTTGCAGGGAAATAGTTATACTCCCAATA
GAGGTGATTTGATGAGCGAGTTCGAAGATGCACTTTTGCAACAGCGACTAAACTATGAAT
CAGGCTCTCGACTAGCCGAGTTAAAGGAAACTCGGTATAAGAATCGTATCCACAACCGAT
TATCTCAACTTGAAGGTGATTGCTGTTTGACTATGCTGCTTGTAATTTTTTGAAAAAGCC
TATGGAGCCAATTATCCTGTGAGATGAATGCTTACTCTTGTGTTTTTTTTTAAAAAAAAT
CAGGATTACCTTCCAATAGAGGTG

Last Updated on 06.12.2018 16:11