Sequences from confirmation amplicon


Confirmation sequences for line SALK_058455 and hit At1g23050 are shown.
Line ID SALK_058455
Locus At1g23050 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:8169099
Primers used for PCR BN01 - R204, show primer details
   
Sequence Name 12-K107313-SALK_058455C-BN01
GenBank Accession LN484602 [GenBank]
Sequencing primer gene specific primer, BN01: 5'-CCATTCGTTAACCTCCATACTGTT-3'
Sequence (A. th genome BLAST matches underlined)
>12-K107313-SALK_058455C-BN01
GTGACGTTATTGACGTTGCTCGTGCTTATCCTAATTCATGGATCGCGACAAATAATTATG
TGATGTAACGTTTCAAATGCATATATATGTCTTACCGTGTCAATATAATGAGTAAATATC
TAAATAATACAAGAAATACTTCGAATAATGTTCTTAAGTAAATCAACAATTTTTTCTGCT
ACAGTTCCGCTTCAGTATATTCTAAAGTATTACAATATCTCTTACATACATAACACACAA
AAAAACTCCCACAAGAGTTACGTATTTATTAAGTTATAAACAGAATGTACTGGATATATT
GTGGTGTAAACAAATTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGT
ACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCC
TGGCCCTGAGAGAGTTGCAGCAAGCGGNTCCACG
   
Sequence Name 52-K107289-SALK_058455C-R210
GenBank Accession LN485551 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>52-K107289-SALK_058455C-R210
GTGCTAGCGTCATTTGTTTACCACAATATATCCAGTACATTCTGTTTATAACTTAATAAA
TACGTAACTCTTGTGGGAGTTTTTTTGTGTGTTATGTATGTAAGAGATATTGTAATACTT
TAGAATATACTGAAGCGGAACTGTAGCAGAAAAAATTGTTGATTTACTTAAGAACATTAT
TCGAAGTATTTCTTGTATTATTTAGATATTTACTCATTATATTGACACGGTAAGACATAT
ATATGCATTTGAAACGTTACATCACATAATTATTTGTCGCGATCCATGAATTAGGATAAG
CACGAGCAACGTCAATAACGTCACTTTTCGTGGGTGAGTTCATAGATAGTGGACAACAGT
ATGGAGGTTAACGAATGG
Primers used for PCR BN02 - LBb3, show primer details
   
Sequence Name 80-K119304-SALK_058455C-BN02
GenBank Accession LN486228 [GenBank]
Sequencing primer gene specific primer, BN02: 5'-TTAGTCATATCCGACACACCATGT-3'
Sequence (A. th genome BLAST matches underlined)
>80-K119304-SALK_058455C-BN02
GTGGCTCCTCCCACCTTCCATGACTCAACCACCACCATATCCTCCTCCAGGCGTTAACTA
CCCTACTCCAGCTGGGAATTTACCAAATTACCCTCCTCCGGTTGGGAATATACCTAACTA
CCCTTCTCCACCGTATGGTGGCGGAGACAGTAGTGGCAGCAGCTTCTATGGCCCTCCACC
GCCGAATGCTATTTTGCCGTACTTCCCTTACTACTTTAGAAAACCTCCTCACCAAACGGA
TCAAACGTCCTCGTCTTCACACGTGGCGGTTCCAGGGAAATGGACGGTGAGGATCGTAGC
CGTGGCAAATCTTGTGGTTGTTGGAGTTCTCGGTAACACATTGATATATCACATTGACGC
TTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTC
ACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGC
AAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCGAAA
TCGGCAAAATAGNAGCATTCGGCGGTG
   
Sequence Name 32-K119303-SALK_058455C-R210
GenBank Accession LN485179 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>32-K119303-SALK_058455C-R210
TCAATGTGTTACCGAGAACTCCAACAACCACAAGATTTGCCACGGCTACGATCCTCACCG
TCCATTTCCCTGGAACCGCCACGTGTGAAGACGAGGACGTTTGATCCGTTTGGTGAGGAG
GTTTTCTAAAGTAGTAAGGGAAGTACGGCAAAATAGCATTCGGCGGTGGAGGGCCATAGA
AGCTGCTGCCACTACTGTCTCCGCCACCATACGGTGGAGAAGGGTAGTTAGGTATATTCC
CAACCGGAGGAGGGTAATTTGGTAAATTCCCAGCTGGAGTAGGGTAGTTAACGCCTGGAG
GAGGATATGGTGGTGGTTGAGTCATGGAAGG

Last Updated on 06.12.2018 16:11