Sequences from confirmation amplicon


Confirmation sequences for line SALK_062093c and hit At1g34340 are shown.
Line ID SALK_062093c
Locus At1g34340 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:12531817
Primers used for PCR 03rk - LBb3, show primer details
   
Sequence Name 12-K116171w-SALK_062093C-03rk
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer gene specific primer, 03rk: 5'-TCCATCTCCATACGATCTTCTCTT-3'
Sequence (A. th genome BLAST matches underlined) 
>12-K116171w-SALK_062093C-03rk
CGCTCTCTTCGTTCTCTGTACATCTTCTTCTAAATTTCGTCGAATTTCACTTCCTTGGAG
ATGCGATTCTTCGTTATTTCAGATGTCGCGTCAATCTCATTTACAATCCAGATTCTCCTC
TTTATCACGGTGTTGTTTCTCGGTGTCAGATTCTTCACGGCCGGTGAGTGTATGTGTGTG
TACTTCGATTTTGGGCGAAAATTGTGGATTTAGATTTCTGATTTTTTGAATTTTTTTTGT
TCAGATATGTGGCGACGCCATGGTTAGCGAGCCCTCATATTCAGACTTGTTTCTTGAATT
TCCATGGATTGCCTCCAGTTTTCACCTATACAAGGTGATTTGGTATTTTTCAATATTTCT
GTTTGATTTTGAGTCACAAATTTGTATGTTTTATTGTATTGTTTTAGACAGCTATTTCTT
ACTTCTGATGGTGGAACGATTGCATTAGATTGGCTTACGAATTCTGATGGTAAGATTTTA
GTGACTGATTTTACTACCAATATGGTTGGTTTTGGATGGATATTTGAATCTGTTTGATTT
GTGTAGTTCTTGATGGTTCTCTTCACAATAAGAGTGAAATTACAAAAGAAGATACAACGC
CTATAGCTGTTGTTATTCCAGGGTTAACTAGTGATTCTTCATCTGCAGTAAGTTTAGTTT
TAAATCACTTATCTGTTCTTTAATGGCTAATTGACTTTATATTGGTGATTTTTTGTTGTA
GTATTTAAAGCATCTTGCTTACGACACTGCAAAAACAGGTTGGAATGTTGTTATTAGCAA
CCATAGAGGATTGGCAAATTGACAAATTGACGCTTAGACAACTTAATAACACATTGCGGA
CGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTG
CCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGC
AGGCGAAAATCCTGT
   
Sequence Name 06-K116170w-SALK_062093C-R210
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined) 
>06-K116170w-SALK_062093C-R210
CATTTGCCATCCTCTATGGTTGCTAATAACAACATTCCAACCTGGTTTTTGCAGTGTCGT
AAGCAAGATGCTTTAAATACTACAACAAAAAATCACCAATATAAAGTCAATTAGCCATTA
AAGAACAGATAAGTGATTTAAAACTAAACTTACTGCAGATGAAGAATCACTAGTTAACCC
TGGAATAACAACAGCTATAGGCGTTGTATCTTCTTTTGTAATTTCACTCTTATTGTGAAG
AGAACCATCAAGAACTACACAAATCAAACAGATTCAAATATCCATCCAAAACCAACCATA
TTGGTAGTAAAATCAGTCACTAAAATCTTACCATCAGAATTCGTAAGCCAATCTAATGCA
ATCGTTCCACCATCAGAAGTAAGAAATAGCTGTCTAAAACAATACAATAAAACATACAAA
TTTGTGACTCAAAATCAAACAGAAATATTGAAAAATACCAAATCACCTTGTATAGGTGAA
AACTGGAGGCAATCCATGGAAATTCAAGAAACAAGTCTGAATATGAGGGCTCGCTAACCA
TGGCGTCGCCACATATCTGAACAAAAAAAATTCAAAAAATCAGAAATCTAAATCCACAAT
TTTCGCCCAAAATCGAAGTACACACACATACACTCACCGGCCGTGAAGAATCTGACACCG
AGAAACAACACCGTGATAAAGAGGAGAATCTGGATTGTAAATGAGATTGACGCGACATCT
GAAATAACGAAGAATCGCATCTCCAAGGAAGTGAAATTCGACGAAATTGTAGAAGAAGAT
GGTACAGAGAACGAAGAGAGCGATGAGGTAGTGACGAATCGGGATGAGAGTTAGAGCTTG
AAAGAGAAG

Last Updated on 06.12.2018 16:11