Sequences from confirmation amplicon


Confirmation sequences for line SALK_062853c and hit At2g33270 are shown.
Line ID SALK_062853c
Locus At2g33270 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:14104957
Primers used for PCR 58us - LBb3, show primer details
   
Sequence Name 01-K117668-SALK_062853C-R210
GenBank Accession LN484292 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>01-K117668-SALK_062853C-R210
TAGGAATTCAGGAAGCGTTGGAGAACATGGGAGGGAGCAATGTAGCATTGGAGAAACAAA
GGGGCTTGAGGAGAAAGAACTTGTCGCCATGGCTGCAAATAAAGACTTGTCATTCGATTA
TAAACCCACATCGTGTGGAAATATCCAAGAGCAAAAAAAGAAAGAAATATTTCTCCCGAA
ATCTCCAACTTTTAATAAACAAAAAGAAGTAGAACATTCTCTACTACTAGTTAGTCCTGC
TCCTGCATGAATGGTCTAGCATTGCTGTTACCATTTGCTTGTGTGATTCAATA
   
Sequence Name 38-K117669-SALK_062853C-58us
GenBank Accession LN485271 [GenBank]
Sequencing primer gene specific primer, 58us: 5'-TATTGAATCACACAAGCAAATGGT-3'
Sequence (A. th genome BLAST matches underlined)
>38-K117669-SALK_062853C-58us
CTAGTAGTAGAGAATGTTCTACTTCTTTTTGTTTATTAAAACTTGTAGATTTCGGGAGAA
ATATTTCTTTCTTTTTTTGCTCTTGGATATTTCCACACGATGTGGGTTTATAATCGAATG
ACAAGTCTTTATTTGCAGCCATGGCGACAAGTTCTTTCTCCTCAAGCCCCTTTGTTTCTC
CAATGCTACATTGCTCCCTCCCATGCTTCTCCAACGCTTCCTTGAATTTCCTTATCTGCA
AAAACAAAACAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCA
GTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGC
GGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCGAAATCGG
CAAAA

Last Updated on 06.12.2018 16:11