Sequences from confirmation amplicon


Confirmation sequences for line SALK_072274c and hit At5g63510 are shown.
Line ID SALK_072274c
Locus At5g63510 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:25425035
Primers used for PCR 19gg - LBb3, show primer details
   
Sequence Name 23-K112064-SALK_072274C-19gg
GenBank Accession LN484946 [GenBank]
Sequencing primer gene specific primer, 19gg: 5'-CCTTGAAGAAATCCAAAATCCATA-3'
Sequence (A. th genome BLAST matches underlined)
>23-K112064-SALK_072274C-19gg
TCACTTCTAACCTGATCCGTCGTTGCTTCGCTGCGGAAGCGGCGTTGGCGAGGAAGACAG
AGTTACCTAAACCGCAATTCACGGTGTCGCCGTCGACGGATCGTGTGAAATGGGACTACA
GAGGCCAACGACAGATCATTCCTTTGGGACAGTGGCTTCCGAAGGTAGCCGTTGATGCTT
ACGTGGCACCCAACGTTGTGCTGGCTGGTCAGGTCACAGTCTGGGACGGCTCGTCTGTTT
GGAACGGTGCCGTTTTGCGCGGCGATCTCAACAAAATCACTGTTGGATTCTGCTCGAATG
TACAGGAACGGTGTGTTGTTCATGCCGCCTGGTCTTCCCCAACAGGTTATTGCTTCCTTC
CTTCCATTTTCAAAAAAAATTGTGTTCTGATTATCCAATTTTTTGTATGGAATCAAGACA
ATGTTGATTGGGATTTAGGGGTTTTCATTGTCCATTTTCAGTTATGAAAAGCTTATTGAA
GAGTCGAGAACTTATATGGACAATTAAGTAAATTGGTTCTGCATAATAGTGTTCTCTCGA
GTACAGATTTTCTTGCTTGAAGAATCGTCCAGTGAACTGTGGCTGTGGCTATGGTTCTTA
CTCTTTTGAGCATAATGAGTTTTAACTTCGCCGATNATGTGTGTGGAAACGTGTTGTTCT
TTAGGTGATTAGCATTACAGGAATCAAGAAACTAACTGAAGATTGAGCTTAATATTGAGA
GTTGAATAGATTAGCGTAGTACCACACACGATCATCTTGTGTAGTAGTAGGAAGTTTCTT
AGCAGAAATTTGGGAACAATGTCTCGATNAAAGGATTTTGGTTTTTTTAATGACTTATGC
AAGGATTTGGTTTTCTGGTCACTCGTGACTGGAAGTGGGATGCAATGGTGATAAAGCTGT
ATCACATGGATGTGAACTTGTTTTTGCTCCCAGGTTTAGACAAGGATATATNGTGGTGTA
AACAAATTGACGC
   
Sequence Name 07-K112049-SALK_072274C-R210
GenBank Accession LN484458 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>07-K112049-SALK_072274C-R210
GTCATTTGTTACACCACAATATATCCTTGTCTAACCTTGGAGCAAAACAAGTTCACATCC
ATGTGATACAGCTTTATCACCATTGCATCCCACTTCCAGTCACGAGTGACCAGAAAACCA
AATCCTTGCATAAGTCATTAAAAAAACCAAAATCCTTTTATCGAGACATTGTTCCCAAAT
TTCTGCTAAGAAACTTCCTACTACTACACAAGATGATCGTGTGTGGTACTACGCTAATCT
ATTCAACTCTCAATATTAAGCTCAATCTTCAGTTAGTTTCTTGATTCCTGTAATGCTAAT
CACCTAAAGAACAACACGTTTCCACACACATAATCGGCGAAGTTAAAACTCATTATGCTC
AAAAGAGTAAGAACAATAGCCACAGCCACAGTTCACTGGACGATTCTTCAAGCAAGAAAA
TCTGTACTCGAGAGAACACTATTATGCAGAACCAATTTACTTAATTGTCCATATAAGTTC
TCGACTCTTCAATAAGCTTTTCATAACTGAAAATGGACAATGAAAACCCCTAAATCCCAA
TCAACATTGTCTTGATTCCATACAAAAAATTGGATAATCAGAACACAATTTTTTTTGAAA
ATGGAAGGAAGGAAGCAATAACCTGTTGGGGAAGACCAGGCGGCATGAACAACACACCGT
TCCTGTACATTCGAGCAGAATCCAACAGTGATTTTGTTGAGATCGCCGCGCAAAACGGCA
CCGTTCCAAACAGACGAGCCGTCCCAGACTGTGACCTGACCAGCCAGCACAACGTTGGGT
GCCACGTAAGCATCAACGGCTACCTTCGGAAGCCACTGTCCCAAAGGAATGATCTGTCGT
TGGCCTCTGTAGTCCCATTTCACACGATCCGTCGACGGCAACACCGTGAATTGCGGTTTA
GGTAACTCTGTCTTCCTCGCCNACGCCGCTTCCGCAGCGAAGCAACGACGGATCAGGTTA
GAAGTGACTCCTCTCGAGACAATCGAGCTATCGAAGTCGCCATTGCTATGGATTT

Last Updated on 06.12.2018 16:11