Sequences from confirmation amplicon


Confirmation sequences for line SALK_076386c and hit At2g47090 are shown.
Line ID SALK_076386c
Locus At2g47090 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:19342768
Primers used for PCR 13vt - LBb3, show primer details
   
Sequence Name 20-K118412-SALK_076386C-13vt
GenBank Accession LN484867 [GenBank]
Sequencing primer gene specific primer, 13vt: 5'-AAGCTTGAGAAGAACCAGAAGTTG-3'
Sequence (A. th genome BLAST matches underlined)
>20-K118412-SALK_076386C-13vt
TAACTAACTCTCTGAATTCTGTCCAATCTTGATTGGCCTTGGTTTGCACGATGTCTTTGA
CGAGTAGTCGTGGTGTTACTAACTAAACTCTCTGAGTTCTGTCCAAATCTTGATTGGCCT
TGGTTTGCTTGCACAGAGAGTGGAGGAAAAGAAGATTCTCCAAGACGTGAATTTCCAGAG
CGTCCCACATGTTGAGGAAGATTATTATCGTCGTTAAAGGCATAAGATGCTTATTGCGGA
TTATCAGGATATATTGTTAACGCTTATAAGGGATTTTATGCCTTTAACACATTGGAATCT
GTTTCCACGATCCTAAGTTGTGGTGTAAACAAATTGACGCTTAGACAACTTAATAACACA
TTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAG
CTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTG
CCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCGAATCGGGCAAAAT
   
Sequence Name 04-K118411-SALK_076386C-R210
GenBank Accession LN484385 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>04-K118411-SALK_076386C-R210
CATTTGTTACACCACAACTTAGGATCGTGGAAACAGATTCCAATGTGTTAAAGGCATAAA
ATCCCTTATAAGCGTTAACAATATATCCTGATAATCCGCAATAAGCATCTTATGCCTTTA
ACGACGATAATAATCTTCCTCAACATGTGGGACGCTCTGGAAATTCACGTCTTGGAGAAT
CTTCTTTTCCTCCACTCTCTGTGCAAGCAAACCAAGGCCAATCAAGATTTGGACAGAACT
CAGAGAGTTTAGTTAGTAACACCACGACTACTCGTCAAAGACATCGTGCAAACCAAGGCC
AATCAAGATTTGGACAGAATTCAGAGAGTTTAGTTAGTAACACCACGACTACTCGTCAAA
GACATCAAACAAATAGAAGTGCAACTTCTGGTTCTCATCAAGCTT

Last Updated on 06.12.2018 16:11