Sequences from confirmation amplicon


Confirmation sequences for line SALK_079990c and hit At2g05090 are shown.
Line ID SALK_079990c
Locus At2g05090 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:1818584
Primers used for PCR 27hd - LBb3, show primer details
   
Sequence Name 71-K112564-SALK_079990C-27hd
GenBank Accession LN486030 [GenBank]
Sequencing primer gene specific primer, 27hd: 5'-CATGGTGTTTGAAAATAATGCAAC-3'
Sequence (A. th genome BLAST matches underlined)
>71-K112564-SALK_079990C-27hd
ATGGACAATACGAAGAGGTATATGTTATACAAATTGTCACTCTCTTAGTGGTATAGATAC
GTTTATGTTATTAATGTAGATTACTAATCATAATGTCCGTCATGTTTTTAGATTGAAGAT
CCTACCATCAAACCTGATGTAATCACTAATTTGTGTGGAAAGACATTCCATTTTCTGGTA
AGTGTTGAGAAAGCCAATATTTATGGTGGCAAAGATATTCACAAAGTTACAAAGGTGCAT
CTTGGAATAGATATAACCAAAGAAGAATCAGGTTTGCTTGAAAACACTCAGGATGATCCA
CTAACCATTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGG
TGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCT
GAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGA
TGGTGGTTCCGAATCGGGCAAAA
   
Sequence Name 55-K112563-SALK_079990C-R210
GenBank Accession LN485625 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>55-K112563-SALK_079990C-R210
GGATCATCCTGAGTGTTTTCAGCAAACCTGATTCTTCTTTGGTTATATCTATTCCAAGAT
GCACCTTTGTAACTTTGTGAATATCTTTGCCACCATAAATATTGGCTTTCTCAACACTTA
CCAGAAAATGGAATGTCTTTCCACACAAATTAGTGATTACATCAGGTTTGATGGTAGGAT
CTTCAATCTAAAAACATGACGGACATTATGATTAGTAATCTACATTAATAACATAAACGT
ATCTATACCACTAAGAGAGTGACAATTTGTATAACATATACCTCTTCGTATTGTCCATCT
AATAACTCTTCAGAAGACTTTCTAATGAGATTGGTTGCATTATTTTCAAACACCAT

Last Updated on 06.12.2018 16:11