Sequences from confirmation amplicon


Confirmation sequences for line SALK_080154c and hit At5g43590 are shown.
Line ID SALK_080154c
Locus At5g43590 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:17511767
Primers used for PCR 85cs - LBb3, show primer details
   
Sequence Name 08-K109680-SALK_080154C-85cs
GenBank Accession LN484486 [GenBank]
Sequencing primer gene specific primer, 85cs: 5'-GAAACAAGAATCTCACACGTCAAA-3'
Sequence (A. th genome BLAST matches underlined)
>08-K109680-SALK_080154C-85cs
TATGTTCATTACACTATTATCTTACAAATAATCGAGTAGATCCGCTAGCATATATATAGA
TGCGCATATGAAATTTAGATGATAACCCTTACTTTCTAGAAAAGAGTTTTGATCAAAATA
CAAAATGTTGGGGATTCAATCAAAACAAACATCTATAATTATAATATGTAAATGTAAAAA
AACTGAAAACAAATATTCGCTGCACTAGTGAAAGGTTTTATGTATAACCTGAAGATGTTT
TTCAAGATTAGCAAGGATGACTCCCCCAATGATTCCTCGGACTCCGCCGCCGTCGAGGCT
GAGGATGGTTACAAGGTTTCCGTATTTCGGCGGTTTATTGTTCTTGAACATCGAATCATC
CTTTATAACCAATTCTTCTTTTTCTGAGAACTGATTATAACTTTCGTTAGAACTCAATCT
AGCCCTAGGAATTCCAAAATTTTGGATTTTCTTCCCACTGAAATTGTTAATAGTGGCTAA
TTTTGAAACACAGTGAAAAGCATTTGATCGATGATATCGACCAACAAAGCGAGTCATCAA
CCACTGGACCATACTTAGTTAATGACTCGTTTTTCTTTTGAGTTGTAAAAGTTTAAATCT
AAAAATTGGTTTAGAAACCAAAAAAAAAAGAAAAAAATCACCACCTAATTGAGTAAACAA
ATTGACGCTAAAACAACTTAATAACACATTGCGAACGTTTTTAATGTACTGGGGTGGTTT
TTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGA
GTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGG
TT
   
Sequence Name 24-K109679-SALK_080154C-R210
GenBank Accession LN484971 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>24-K109679-SALK_080154C-R210
CATTTGTTACTCATTTAGTTGTTGATCTTCTTCTTTTTTTTTTGGTTTCTAAACCAATTT
TTAAATTTAAACTTTTACAACTCAAAAAAAAAACGAGTCATTAACTAAGTATGGCCCAGG
GGTTGATGACTCCCTTTGTTGGTCAATATCATCGATCAAAGGCTTTTCACTGGGTTTCAA
AATTAGCCACTATTAACAATTTCAGGGGGAAAAAAATCCAAAATTTTGGAATTCCTAGGG
CTAGATTGAGTTCTAACGAAAGTTATAATCAGTTCTCAAAAAAAAAAAAATTGGTTATAA
AGGATGATTCAATGTTCAAAAACAATAAACCGCCAAAATACGGAAACCTTGTAACCATCC
TCAGCCTCAACGGCGGCGGAGTCCAAGGAATCATTGGGGGAGTCATCCTTGCTAATCTTG
AAAAACATCTTCAGGTTATACATAAAACCTTTCACTAGTGCAGCGAATATTTGTTTTCAG
TTTTTTTACATTTACATATTATAATTATAGATGTTTGTTTTGATTGAATCCCCAACATTT
TGTATTTTGATCAAAACTCTTTTCTAGAAAGTAAGGGTTATCATCTAAATTTCATATGCC
CATCTTTATATATGCTAGCGGATCTACTCGATTATTTGTAAAATATATAGTAGTAATTGA
ACCTTTATATCATTGTGTAAACGAGTTTGAC

Last Updated on 06.12.2018 16:11