Sequences from confirmation amplicon


Confirmation sequences for line SALK_080688c and hit At4g38950 are shown.
Line ID SALK_080688c
Locus At4g38950 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:18154756
Primers used for PCR 28hd - LBb3, show primer details
   
Sequence Name 72-K112564-SALK_080688C-28hd
GenBank Accession LN486056 [GenBank]
Sequencing primer gene specific primer, 28hd: 5'-CTAGTATCCGGACTTTCGTTGAAG-3'
Sequence (A. th genome BLAST matches underlined)
>72-K112564-SALK_080688C-28hd
TAGTTCATACATATATACTAATCGATTCTTCTATGTAGCTTACAATTGATTTTCAAGGTT
TGTTTGATCAGGTCTCAAATGCTGAGGATTCTGGTAAAATGAGGAGGGACATTGGTCTGG
ACTCCATGGACAGAGAATTTGAGAGACAGCGGCAAGAGATTCTGGAGCTATGGCAAACTT
GTAACATCTCTTTGGTGCATAGAACATACTTTTACTTGCTCTTCAAAGGAGATGAGGCGG
ATTCAATCTACATCGGAGTAGAGCTAAGAAGACTTTTGTTTATGAAAGATAGCTTCTCTC
AGGGAAACCAAGCATTGGAAGGAGGAGAAACCTTAACATTGGCCTCAAGGTTAGATCTTT
TTGGCGTGTGTATATAGCGTTTGGCATTAGTGGTTGCAGTTTTTTTTAATGCCTACTATT
TTTTTTTTTGGGGTAAACCCGGAAAAACCTTCACAGGGAAAAAAAAATGCTAACCAACCT
GGGGGGGAAAAGGTTTTCGGGAAAAAAGAGGAAAAAATTCTCCCACAGTTTGGGGATTGC
AATAAACTCCAAACGCAGGCGGTTACAACTTGTGAATGACCTCTGGACCATTCCCAAGGA
CTTGACTCAGGTTATGGAAACAATTTGACCCTAAAACAACTTAATAACACATTGCGAACT
TTTTTAAGGTACGGGGGGGGTTTTTCTTTTCACCATTGAAACGGGCAACAGCTGATTGCC
CTTCACCGCCGGGCCCTAAGAGATTTGCACCAAGCGGTCCACCCTGGTTTGCCCCAGCGG
GCAAAAATCCGGTTGGAGGGTGGTTCCAAACCGGGCCAA
   
Sequence Name 56-K112563-SALK_080688C-R210
GenBank Accession LN485645 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>56-K112563-SALK_080688C-R210
TTTGTTTCATAACCTGAGTCATGTCCTTGGGATTGCTCCAGAGCTCATTCACAAGTTGTA
ACCGCCTGCGTTTGGAGTTAATCGCAATCCCAAACTTGTGGTAGATTCTTTTCCTCTCTT
CTCCTGAAAACCTTTTCCCCACAAGCTTGCTCAGCATCTTTCTCTCCCTGTGAAGCTCTT
TCCGGCTTCACCACAAAAAAAAAAATAGTAGGCTTTAAAAAAAACTGCACCCACTAAGGC
CAAACGCTATATACACCCCCCAAAAAAATCTAACCTTGAGGCCAATGTAAAGGTTTCCCC
CCCTTCCAAGGCTGGGTTTCCCTGAAAAAACCTATTTTTCAAAAACAAAATTCTTCTTAC
CTCTCCCCCAATGTAAATGGAACCCCCCTCATCTCCTTTAAAAAGCAAGTAAAAGTATGT
TCTATGCCCCAAAAAAATGTTACAATTTTGCCATACCTCCAAAATCTCTGGCCGCTGTCT
CTCAAATTCTCTGTCCAGGGAGTCCAAACCAATGTCCCTCCTCATTTTACCAAAACCCTC
ACCATTTGAAACCTGATCAAACAACCCTTGAAAATCATTTGTAACCTACTTAAAAAAATC
GATTAGTATATATGTTTATAAACTTACCTCGCCTTGACGCTAACCCTTCTTTTTAACCCC
TTCAACAAA

Last Updated on 06.12.2018 16:11