Sequences from confirmation amplicon


Confirmation sequences for line SALK_084636 and hit At1g20370 are shown.
Line ID SALK_084636
Locus At1g20370 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:7053597
Primers used for PCR 20ow - LBb3, show primer details
   
Sequence Name 21-K115143-SALK_084636C-20ow
GenBank Accession LN484887 [GenBank]
Sequencing primer gene specific primer, 20ow: 5'-CCATTCGTAATTTCTTGGTTTGTT-3'
Sequence (A. th genome BLAST matches underlined)
>21-K115143-SALK_084636C-20ow
AGCCTCTTCGACACACCTTCATGGTTTTGGCGCCGGGATTCTTTTGCATTCCCTGATACC
CTACTCCGCAGAACGCAAACACGATTGCGACTTTCCGGCGTCTGTATTTCGGCGCTCTAC
GCTCAGCGACATTGCTTCCGCCGGTGGTAACAGCCGAGGAATCAGTTTCCTGGCCGGTGG
TCGAAATCTTGAGCTTCTTATGGTCTGGTTCTCTATCAGGAACATCGTCTCGAGGCAATT
TCTCGATATCAGGCTCTTGATTCTCCATTTTCACCACTGAGTGAAAACAAATTGACGCTT
AGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCAC
CAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCGGGCCCTGAGAGAGTTGCAGCAA
GCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCGAA
   
Sequence Name 05-K115142-SALK_084636C-R210
GenBank Accession LN484407 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>05-K115142-SALK_084636C-R210
CATTTGTTTTCCTCGTGGTGAAATGGAGAATCAGAGCCTGATATCGAGAAATTGCCTCGA
GACGATGTTCCTGATAGAGAACCAGACCATAAGAAGCTCAAGATTTCGACCACCGGCCAG
GAAACTGATTCCTCGGCTGTTACCACCGGCGGAAGCAATGTCGCTGAGCGTAGAGCGCCG
AAATACAGACGCCGGAAAGTCGCAATCGTGTTTGCGTTCTGCGGAGTAGGGTATCAGGGA
ATGCAAAAGAATCCCGGCGCCAAAACCATTGAAGGCGAGCTCGAAGAGGCTTTGTTCCAT
GCCGGAGCAGTACCTGATGCTGATCGGAACAAACCAAGAAATTACGAATGG

Last Updated on 06.12.2018 16:11