Sequences from confirmation amplicon


Confirmation sequences for line SALK_100709 and hit At1g19170 are shown.
Line ID SALK_100709
Locus At1g19170 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:6617642
Primers used for PCR 54qv - LBb3, show primer details
   
Sequence Name 16-K115992-SALK_100709C-54qv
GenBank Accession LN484724 [GenBank]
Sequencing primer gene specific primer, 54qv: 5'-GTGGTGTTTGATTTGAAGGATTTT-3'
Sequence (A. th genome BLAST matches underlined)
>16-K115992-SALK_100709C-54qv
TTACCTGAGCATTCGAGAGAGCTGTGATTTCATCTCTAAGCTTGGGGGAAGTAGCGGCGG
AGGTCAGCTGAATGTGCCGCCTGGACGGTGGCTTACGGCGCCGTTTAATCTCACTAGCCA
TATGACTCTGTTTCTCGCAGAGGATTCCGAGATTCTTGGTGTTGAGGTTTGTAAAATGTT
TTGATTTCCTCTTGTTTTGCTTTCATTTCGAAACAATGAAACGAATGCAAAAGATTGATT
GGTAATTGTTTACTGAAAGTCAGACTCTTTAGCTCTGTTTAGGTCAGAATTGCAGAAATT
TAAGCACCACTAAGCTTGGAACATTAGATTTGTAGGTTACAGGTCACTCACTCTAGCCAA
GTTAGAGTACAAATGACTGTGTTTGCTTGTTGTGTGAAGGAACATAATTTAGGAGATTTT
GAGACTTTGCGTGATGGATGTGTGCGTCTTGTTTACTTAACGTGTCACTTTAATTGTCAG
GATGAGAAGTATTGGCCTTTAATGCCACCATTGCCTTCATATGGTTACGGTAGAGAGCGT
CCGGGACCTCGTTATGGGAGCCCCCGATTGCGGACAACAGCTGATTGCCCTTCACCGCCT
GGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCT
GTTTGATGGTGGTTCCG
   
Sequence Name 07-K115991-SALK_100709C-R210
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>07-K115991-SALK_100709C-R210
TAACTTGTCACTCTCTCTGGCCGAGTCAGATAACAAATGAGCGTGTGTGCTTGTTGTGTG
AAGGAACAGAATTTGGGAGTATTTCGTGTCTTTACACGAGGGACGTGTGCGTC

Last Updated on 06.12.2018 16:11