Sequences from confirmation amplicon


Confirmation sequences for line SALK_105118c and hit At2g04350 are shown.
Line ID SALK_105118c
Locus At2g04350 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:1518458
Primers used for PCR 42kh - LBb3, show primer details
   
Sequence Name 09-K114130-SALK_105118C-R210
GenBank Accession LN484523 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>09-K114130-SALK_105118C-R210
AATATATCCTGGGGTTACAAATTAATAACACATTGCGTCCACAATATATAGATTTCTGAG
AATCCATGTGACGATTTCAGGTCGATGAGAAGGGCACAAGGTGGTTTTACACCGGAGATA
TTGGGAGATTCCACCCTGATGGATGTCTCGAAGTCATCGATAGAAAGAAAGATATTGTTA
AACTTCAACATGGGGAATACGTATCCCTTGGAAAGGTTTGCCTATAGAACTTAAATTCTA
CATAGAGGATGGTGGTATATGATAAAATCTCATCATGCTCTTTCATTGCCTGGATCACAC
AATTCACAGGTGGAGGCAGCTTTGGGTTCGAGCAATTACGTTGATAACATCATGGTCCAC
GCAGACCCAATTAACAGCTACTGTGTAGCTCTTGTTGTTCCATCACGAGGAGCATTAGAG
AAATGGGCAGAGGAAGCTGGAGTTAAACACAGCGAATTCGCTGAGCTATGCGAGAAAGGT
GAAGCAGTCAAGGAGGTTCAACAATCTCTTACCAAGGTTTGTATTTTCAATAGCTGTCTC
AGGTTTTCACCNATTACG
   
Sequence Name 19-K114131-SALK_105118C-42kh
GenBank Accession LN484820 [GenBank]
Sequencing primer gene specific primer, 42kh: 5'-CGTAATTGTGAAAAACCTGAGACA-3'
Sequence (A. th genome BLAST matches underlined)
>19-K114131-SALK_105118C-42kh
GTTGACCTCCTTGACTGCTTCACCTTTCTCGCATAGCTCAGCGAATTCGCTGTGTTTAAC
TCCAGCTTCCTCTGCCCATTTCTCTAATGCTCCTCGTGATGGAACAACAAGAGCTACACA
GTAGCTGTTAATTGGGTCTGCGTGGACCATGATGTTATCAACGTAATTGCTCGAACCCAA
AGCTGCCTCCACCTGTGAATTGTGTGATCCAGGCAATGAAAGAGCATGATGAGATTTTAT
CATATACCACCATCCTCTATGTAGAATTTAAGTTCTATAGGCAAACCTTTCCAAGGGATA
CGTATTCCCCATGTTGAAGTTTAACAATATCTTTCTTTCTATCGATGACTTCGAGACATC
CATCAGGGTGGAATCTCCCAATATCTCCGGTGTAAAACCACCTTGTGCCCTTCTCATCGA
CCTGAAATCGTCACATGGATTCTCAGAAATCTATATATTGTGGACGCAATGTGTTATTAA
TTTGTTAACCCCAGGATATATTGTGGTGTAAACAAATTGACGCTTAGACAACTTAATAAC
ACATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAA
CAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGT
TTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCG

Last Updated on 06.12.2018 16:11