Sequences from confirmation amplicon


Confirmation sequences for line SALK_110809c and hit At5g48250 are shown.
Line ID SALK_110809c
Locus At5g48250 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:19561723
Primers used for PCR 18ck - LBb3, show primer details
   
Sequence Name 61-K108702-SALK_110809C-18ck
GenBank Accession LN485758 [GenBank]
Sequencing primer gene specific primer, 18ck: 5'-GGAATCACATAGCTTGCATACTGA-3'
Sequence (A. th genome BLAST matches underlined)
>61-K108702-SALK_110809C-18ck
TAATTGATTGTCCGCAGGAAACAAGCGAGGGAGATGATTTTGCCGGTTTGTCAGGAGATG
AAAGTTATGAAGACTGAAGAGTTTAAACTAGTAGTTAAACGAGCAAACTTTAATTTTGCC
TTTGTATCATGCAAATTTTGTCTGATCAATATGAATGAATTCAGTTTTTTGATAGTGCAA
AAGGATCCTGAAAGGTTGTGATTCTTGTGGTTACGCTTTTAGAAAATACACTTGTTAGTA
TCATTAACCAATACCGTAAATATAGAAGTGATGATACTCCAAACTTCTACATGGTTATTA
TTTATATGACGTAAAAAAAATATACATTCGTTGTTTTGCCTTGGCTACACAAATTATAAT
AGGACAAAATTTAAGGATCATGAACCTGAATCTGTAGAAGAGTTTCTAGTTTCACAGTCA
AGTCATGATGCCAAATGACAGAAGAAGATAACAAACTTTATGCAAAAAATGAGGCAGAAC
TGCAGAAGCATGCGCCTTTCTAAGCAAGTATGACGCTTTTGAGGCGGAGAACTCGTGTTC
CTTTTCAACCAATAATGGCTTCCAGATCCATCGCTGCCAATTAGTTGCATCTCTGTCTTA
TATCTCCACTTTGTGATCTTTCATTGTTTTGAGGTTTTATCCTCAGTGTGGTGTAAACAA
ATTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGTGGTTT
TTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGA
GTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGG
TTCC
   
Sequence Name 53-K108701-SALK_110809C-R210
GenBank Accession LN485575 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>53-K108701-SALK_110809C-R210
GTCATTTGTTACCCACACTGAGGATAAAACCTCAAACAATGAAAGATCACAAAGTGGAGA
TATAAGACAGAGATGCAACTAATTGGCAGCGATGGATCTGGAAGCCATTATTGGTTGAAA
AGGAACACGAGTTCTCCGCCTCAAAAGCGTCATACTTGCTTAGAAAGGCGCATGCTTCTG
CAGTTCTGCCTCATTTTTTGCATAAAGTTTGTTATCTTCTTCTGTCATTTGGCATCATGA
CTTGACTGTGAAACTAGAAACTCTTCTACAGATTCAGGTTCATGATCCTTAAATTTTGTC
CTATTATAATTTGTGTAGCCAAGGCAAAACAACGAATGTATATTTTTTTTACGTCATATA
AATAATAACCATGTAGAAGTTTGGAGTATCATCACTTCTATATTTACGGTATTGGTTAAT
GATACTAACAAGTGTATTTTCTAAAAGCGTAACCACAAGAATCACAACCTTTCAGGATCC
TTTTGCACTATCAAAAAACTGAATTCATTCATATTGATCAGACAAAATTTGCATGATACA
AAGGCAAAATTAAAGTTTGCTCGTTTAACTACTAGTTTAAACTCTTCAGTCTTCATAACT
TTCATCTCCTGACAAACCGGCAAAATCATCTCCCTCGCTTGTTTCCTGCGGACAATTCAA
TTTTAAGTTTCAGATCAAAGAGTATAAATCAGTATGCAAG

Last Updated on 06.12.2018 16:11