Sequences from confirmation amplicon


Confirmation sequences for line SALK_130880c and hit At5g41090 are shown.
Line ID SALK_130880c
Locus At5g41090 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:16446000
Primers used for PCR 28lu - LBb3, show primer details
   
Sequence Name 65-K114145-SALK_130880C-R210
GenBank Accession LN485877 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined) 
>65-K114145-SALK_130880C-R210
ACCACAATATATCCTGCTCACTTTGTCACTTTGTCATTAAAAACAGATTTGTCACTTTGG
CTACTTCTTTCTTGCGTGACAAGCTTTATTTTGTGAACTTGTTTTTGCTCTGTTCTTTCA
GGCTATGGAAGCGAAGAGCATTGGTACTTCTACTGCAAGAAACCCAAGAATCAAGTTACT
AGAACGAAATCTTATAACCTCTGGATACCAACGGGAGAAAAAACTGATGTGTTAGATCCA
AAGAAGAATGGCGGCGAATTAGTCGGTATCAAGCATTCGTTTACTTTCATTGAGAACGAA
GAAGAAGAAGAATCTGATAACAAGAACGGCGATGAAGAAGAACCTCCACAATGCAATTGG
TTCTTGGATGAAATCAGCCTCCCATTGACAGTTGTGGATACTGATTGGACTCTGTGTCAT
ATCTTTTACGAGAAGGTTAAACCTGAATTTGGTAATTTGCATATAGTCGAATCTGAATCC
GAATCCGAAGAAGAAGAAGAAGATGAAAGTGTTGATAAGCCTGCAGAGAGTTTGGATAGT
GTTAAAGAGAAAGATGGAACTGTTCTTCCTCCACCTCCTGCTACACCTTAG
   
Sequence Name 76-K114146-SALK_130880C-28lu
GenBank Accession LN486155 [GenBank]
Sequencing primer gene specific primer, 28lu: 5'-TCATGAAGAAGCTAAGGTGTAGCA-3'
Sequence (A. th genome BLAST matches underlined) 
>76-K114146-SALK_130880C-28lu
TATCCAACTCTCTGCAGGCTTATCAACACTTTCATCTTCTTCTTCTTCTTCGGATTCGGA
TTCAGATTCGACTATATGCAAATTACCAAATTCAGGTTTAACCTTCTCGTAAAAGATATG
ACACAGAGTCCAATCAGTATCCACAACTGTCAATGGGAGGCTGATTTCATCCAAGAACCA
ATTGCATTGTGGAGGTTCTTCTTCATCGCCGTTCTTGTTATCAGATTCTTCTTCTTCTTC
GTTCTCAATGAAAGTAAACGAATGCTTGATACCGACTAATTCGCCGCCATTCTTCTTTGG
ATCTAACACATCAGTTTTTTCTCCCGTTGGTATCCAGAGGTTATAAGATTTCGTTCTAGT
AACTTGATTCTTGGGTTTCTTGCAGTAGAAGTACCAATGCTCTTCGCTTCCATAGCCTGA
AAGAACAGAGCAAAAACAAGTTCACAAAATAAAGCTTGTCACGCAAGAAAGAAGTAGCCA
AAGTGACAAATCTGTTTTTAATGACAAAGTGACAAAGTGAGCAGGATATATTGTGGTGTA
AACAAATTGACGCTNAGACAACTTAATAACACATTGCGGACGTTTTTAATGTACTGGGGT
GGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTG
AGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAT
GGTGGTTCCG

Last Updated on 06.12.2018 16:11