Sequences from confirmation amplicon


Confirmation sequences for line SALK_133220c and hit At1g49630 are shown.
Line ID SALK_133220c
Locus At1g49630 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:18373197
Primers used for PCR 39ea - LBb3, show primer details
   
Sequence Name 31-K110755-SALK_133220C-39ea
GenBank Accession LN485145 [GenBank]
Sequencing primer gene specific primer, 39ea: 5'-CTCAGCTATTCTAGCTTTCAGGGA-3'
Sequence (A. th genome BLAST matches underlined)
>31-K110755-SALK_133220C-39ea
CTCAAAGGATCCATGTCGTATATCCATTTCGCCTAAACATCCAACACTAAAATAAGAAAC
TATACAAATATATTAGATAAGACAAACCAAAGAAAAAGGCAGATAAACTCACAATTGATT
GAAGCATAAGTGATAAACCACGAGGGGACGACCCTGTATTGTTTTCTCTCAGAGAAAACT
CAATGGTATTCATGGATGCTTCAACAGCATCAGTGTCAAACCCCTCATCTGCCAACTTTC
TCAGAGTATTCATGACCAACTCTTCAACTTTTTGGACATTATCATCGGAAACACCTTTCA
AACCTATACTGAATTGGGGCTGGAGAAGTTCATCTTCCATCCCACTATTAACAAGAGCTT
CTCCTAAACCGCTTTCCAATAAGATTTTTCTCAATGGGGAGGCAGGAGTCCCAAGCATTA
GATGATCCAAAAACCCAAGTGCGAGTTGAGTTTGTAAGTCCAGTGGCTTGTCAGAGAGAA
GCCAGTTAAGGCACACCATATGCTTCTTCTTAAGGTCACCATCTTCACCAGCAGGGTATT
TTTCAACAATCCTACGAGGTCTAGAGAAAAGCTTTTGTGGTTCAACCTTTGAACTATCTC
GAGCTGGACTTGCATCAAACATGTCCAAGTATTCTGCACAAATTAGTAAAATAGAGACAA
AATCTGTAAAACAATAACATAATGGCGAACATAGATCAAGAAAAGGAAATGCCCCAACAG
AAAGTACAATTTAAGATATGGCTCTNTACCACTCAAGACGCGAAGGCGGTGAACTGGATC
GTCATCTCCATAGAACCATATCCTGGCATTGCTAGGGTGATAATACTGACGGTGGAACTC
CTGGAATTTTTCACATGAAGAACATAAATATGCATCGGAGATCATAACATACAGAGTATT
ACGCTTTTGTGGTGTAAACAAATTGACGCTTAGACAACTTAATAACACATTGCGGACGTT
TTTATGTACTGGG
   
Sequence Name 23-K110754-SALK_133220C-R210
GenBank Accession LN484944 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>23-K110754-SALK_133220C-R210
GTCATTTGTTTACCACAAAAGCGTAATACTCTGTATGTTATGATCTCCGATGCATATTTA
TTGTTCTTCATGTGAAAAATTCCAGGAGTTCCACCGTCAGTATTATCACCCTAGCAATGC
CAGGATATGGTTCTATGGAGATGACGATCCAGTTCACCGCCTTCGCGTCTTGAGTGGTAA
AGAGCCATATCTTAAATTGTACTTTCTGTTGGGGCATTTCCTTTTCTTGATCTATGTTCG
CCATTATGTTATTGTTTTACAGATTTTGTCTCTATTTTACTAATTTGTGCAGAATACTTG
GACATGTTTGATGCAAGTCCAGCTCGAGATAGTTCAAAGGTTGAACCACAAAAGCTTTTC
TCTAGACCTCGTAGGATTGTTGAAAAATACCCTGCTGGTGAAGATGGTGACCTTAAGAAG
AAGCATATGGTGTGCCTTAACTGGCTTCTCTCTGACAAGCCACTGGACTTACAAACTCAA
CTCGCACTTGGGTTTTTGGATCATCTAATGCTTGGGACTCCTGCCTCCCCATTGAGAAAA
ATCTTATTGGAAAGCGGTTTAGGAGAAGCTCTTGTTAATAGTGGGATGGAAGATGAACTT
CTCCAGCCCCAATTCAGTATAGGTTTGAAAGGTGTTTCCGATGATAATGTCCAAAAAGTT
GAAGAGTTGGTCATGAATACTCTGAGAAAGTTGGCAGATGAGGGGTTTGACACTGATGCT
GTTGAAGCATCCATGAATACCATTGAGTTTTCTCTGAGAGAAAACAATACAGGGTCGTCC
CCTCGTGGTTTATCACTTATGCTTCAATCAATTGTGAGTTTATCTGCCTTTTTCTTTGGT
TTGTCTTATCTAATATATTTGTATAGTTTCTTATTTTAGTGTTGGATGTTTAGGCGAAAT
GGATATACGACATGGATCCTTTTGAGCCATTAAGTATGAGGAACCATTGAGTCCTGAAGC
TAGAAAA

Last Updated on 06.12.2018 16:11