Sequences from confirmation amplicon


Confirmation sequences for line SALK_142221c and hit At3g05180 are shown.
Line ID SALK_142221c
Locus At3g05180 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:1468931
Primers used for PCR 64qz - LBb3, show primer details
   
Sequence Name 85-K116055-SALK_142221C-64qz
GenBank Accession LN486288 [GenBank]
Sequencing primer gene specific primer, 64qz: 5'-GGGGGAAATATTTGAATTTGATTT-3'
Sequence (A. th genome BLAST matches underlined)
>85-K116055-SALK_142221C-64qz
TTTTGTATTCTTTATCTAGAGATTATATGCAGAGGGGGCAAGAAACTATTGGATACACAA
CACAGGACCACTTGGGTGTTTAGCACAAGTTGTGTCAATTTTTGGGGAAGACAAATCAAA
GCTTGATGAGTTTGGTTGTGTCAGTGACCATAACCAAGCTGCTAAGCTTTTCAATTTGCA
GCTTCATGGTCTTTTCAAAAAACTCCCTCAACAATATCCCAATTCCCGTTTCACATACGT
AGATATCTTCTCTATCAAATCCGACCTCATCCTGAATCATTCCAAATATGGTAAGTAACT
AAGTATTAATAATGTTCAGTTCACTCAAATTAGAAAGCATTTTTTTACTTTTGTGTTAGT
GGTGTAAACAAATTGACGCTTAGACAACTTAATAACACATTGCGGACGTTTTTAATGTAC
TGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTG
GCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTG
TTTGATGGTGGTTCCGAATCGGGCAAAAT
   
Sequence Name 58-K116054-SALK_142221C-R210
GenBank Accession LN485696 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>58-K116054-SALK_142221C-R210
CCCAATAAACAAAAGTATAACATGCTTTCTAATTTGAGTGAACTGAACATTATTAATACT
TAGTTACTTACCTTATTTGGAATGATTCAGGATGAGGTCGGATTTGATAGAGAAGATATC
TACGTATGTGAAACGGGAATTGGGATATTGTTGAGGGAGTTTTTTGAAAAGACCATGAAG
CTGCAAATTGAAAAGCTTAGCAGCTTGGTTATGGTCACTGACACAACCAAACTCATCAAG
CTTTGATTTGTCTTCCCCAAAAATTGACACAACTTGTGCTAAACACCCAAGTGGTCCTGT
GTTGTGTATCCAATAGTTTCTTGCCCCCTCTGCATATAATCTCTAGATAAAGAATTACAA
AATGAATTAATAGTATGATGATATCTTATACTCAAATCAAATTCAAATATTTCCCCC

Last Updated on 06.12.2018 16:11