SimpleSearch - Line and FST details
Line specific information
| Line ID | 461D01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N444197) |
| Segregation Analysis | 50:31:19 |
| Confirmed for Hit | At1g07530 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g06365
| Sequence (A. th genome BLAST matches underlined) | >04-K018951-022-461-D01-8409 GAATAGGCTATGCAGTTCAAGAAAGGGGTTGAGGAAGCTAGGGGATCCTCCCTATCGAGT ATCCCATCTCGCTAGTAGGACTTCTTTCTGCTATGACTTCTGTAAACCTTCCTATGGGAC CTCCCTATAGTGAGACGTCCTCGTCGTATTAACTAAGTCTATTATCGAGGACTCGTCCAC TGCTTTGATACACGCTCACACATCATCTAGAGCTCCACGTATGCCATTTTTGGTAATCAC AACTGTGCTATGCGGGATCAACCGAAACCCGGGTTACGGTGCCCAACTGCGCGCTAACCT A |
| GenBank Accession | BX291286 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:14201013 - go to primer design |
| BLAST e Value | 4e-19 |
| Hit Clone Code (BAC ID) | F21A14 |
| Hit Gene Code | At3g06365 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | novel transcribed region |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
Gene hit At1g07530
| Sequence (A. th genome BLAST matches underlined) | >04-K026071-022-461-D01-8409 NNNNNCCGTGATATCCGGACATGAGCCTTTACAATTGAATATAGATGATGAATTGGCTAT GCAGTTCAAGAAAGGGGTTGAGGAAGCTAGTAAGTTCCTTCCTAAGTCTTCTCAGCTCTT TATTGATGTGGATAGTTACATCCCTATGAATTCTGGTTCCAAGGAAAATGGTTCTGAGGT TTTTGTTAAGACGGAGAAGAAAGATGAGACAGAGCATCATCATCATCATAGCTATGCTCC TCCTCCCAACAGATTAACTGGTAAGAAAAGCCATTGGCGCGACGAAGATGAAGATTTCGT TGAAGAAAGAAGTAACAAGCAATCAGCTGTTTATGTTGAGGAAAGCGAGCTTTCTGAAAT GTTTGATAAGATCTTGGTATGTGGCCCTGGGAAACCTGTATGCATTCTTAACCAGAACTT TCCTACAGAATCCGCTAAAGTCGTGACCGCACAGTCAAATGGAGCAAAGATTCGTGGGAA GAAATCAACTTCTACTAGTCATAGTAACGATTCTAAGAAAGAAACTGCTGATTTGAGGAC TCTTTTGGTGTTAT |
| GenBank Accession | CR397431 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2315451 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F22G5 |
| Hit Gene Code | At1g07530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SCARECROW-like 14 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |