SimpleSearch - Line and FST details


Line specific information

 
Line ID 894A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N485734)
Segregation Analysis 50:24:9
Confirmed for Hit At2g21390
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g21390

 
Sequence (A. th genome BLAST matches underlined) 
>41-K112793-0022-894-A06-8409
TGGATGGAGTGAGTCTTCCAGATCCTAACGTCTGTGGCGCGCCAGCTCTTGTTTTTGATT
TCTCTCAGCTTGAAGCATAGCTCAAATCGCGGCTCAAAGCTACAACAGCTGGGAAACTAT
CTGAGGCTCTTCGTGTCTTCCTCTCTGTTCTCCAAACCATCCCATTGGTGGTAGTTGAGT
CAAGAAGAGAAGTAGATGAGGTTAAAGAACTGGTCATCATTGTTAAAGAATATGTCCTCG
GTCTTCAATTGGAGCTCAAGAGGAGAGAGATGAAAGATGATCCGGTGAGGCAGCAAGAGC
TCGCTGCTTACTTCACTCACTGTAAACTTCAAACACCTCACCTACGGCTCGCGTACTTCA
GTGCAATGACCGTCTGCTACAAGTCAAAGAACATGGCTACTGCTGCTCACTTCGCCAGAA
GTTTGTTGGATACAAACCCAACTATTGAGAGCCAGGCCAGGACGGCTAACCTGCCCCAGC
CGCTAATCCTCNGTCTTCNNTTGGNGCTCNNGAGGAGAGAGATGANAGATGATCCGGTGA
GGCAGCAAGAGCTCGCTGCTTACTTCACTCACTGTAAACTTCAAACACCTCACCTACGGC
TCGCGTACTTCANTGCAATGACCGTCTGCTACAAGTCAAAGAACATGGCTACTGCTGCTC
ACTTCGCCNGAAGTTTGTTGGATACAAACCCAACTATTGAGAGCCAGGCCAGGACGGCTA
ACCTGCACGGCCG
GenBank Accession FR817333 [GenBank]
Graphic View Graphic view of gene At2g21390
Predicted Position of Insertion Chr2:9155860 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F3K23
Hit Gene Code At2g21390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Coatomer, alpha subunit
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR817333 [GenBank]


Last Updated on 10.06.2021 13:37