SimpleSearch - Line and FST details


Line specific information

 
Line ID 144F03
Vector Used pAC161
Line Availability available as T3 set from NASC (N413791)
Segregation Analysis 50:42:32
Confirmed for Hit At3g48060 At3g48080
Parent of DUPLO pair none
Parent of pair(s) 12432

Gene hit At3g48050

 
Sequence (A. th genome BLAST matches underlined) 
>22-K013024-022-144-F03-35St
TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGTGTTTGACACTTGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAA
GTCTGGATCCAACCAGGGTGTTTCCTGGCCTGGAAGACTGAGTCATGGGGGAAGGCATTC
AGGTGGTTCCGCGGAGGCAAACAAGACATCATCATCACACCTACATGCTTCTAAGTCTGT
CTCGGTCAAACAACAGGTGGAAAACAACCTGAAGTGTGTAGCCACGTCGCCAGGCTCCAC
AAGATCAGCTCCTTCTCCGGGATCAGGTGGTAATGTTTCTAAAGATGGACAGCAGCGAAA
TGCTGGGGCTGGTGGTGTATCTGAAGTCCTATGGGATCCTCCCTATAGTGAGTCGT
GenBank Accession AL765890 [GenBank]
Graphic View Graphic view of gene At3g48050
Predicted Position of Insertion Chr3:17737907 - go to primer design
BLAST e Value 3e-177
Hit Clone Code (BAC ID) T17F15
Hit Gene Code At3g48050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation protein SUO
Insertion Classification CDSi
Confirmation Status failed

Gene hit At3g48060

Sequence (A. th genome BLAST matches underlined) 
>22-K013024-022-144-F03-35St
TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGTGTTTGACACTTGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAA
GTCTGGATCCAACCAGGGTGTTTCCTGGCCTGGAAGACTGAGTCATGGGGGAAGGCATTC
AGGTGGTTCCGCGGAGGCAAACAAGACATCATCATCACACCTACATGCTTCTAAGTCTGT
CTCGGTCAAACAACAGGTGGAAAACAACCTGAAGTGTGTAGCCACGTCGCCAGGCTCCAC
AAGATCAGCTCCTTCTCCGGGATCAGGTGGTAATGTTTCTAAAGATGGACAGCAGCGAAA
TGCTGGGGCTGGTGGTGTATCTGAAGTCCTATGGGATCCTCCCTATAGTGAGTCGT
GenBank Accession AL765890 [GenBank]
Graphic View Graphic view of gene At3g48060
Predicted Position of Insertion Chr3:17746865 - go to primer design
BLAST e Value 3e-177
Hit Clone Code (BAC ID) T17F15
Hit Gene Code At3g48060 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BAH and TFIIS domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details