SimpleSearch - Line and FST details
Line specific information
| Line ID | 334D05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N432009) |
| Segregation Analysis | 50:49:45 |
| Confirmed for Hit | At5g13150 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit F28P10
| Sequence (A. th genome BLAST matches underlined) | >36-K016061-022-334-D05-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATGTATATTGCATGTACAC TATTGTTTACATGTACGAGACACTTCGTGATTTGATTCCTGCGGCGGAACAATGCGTGAT TCAGATTTGATCCATTGAGATGTAACACTGGCTCAAACGCGGTTATGGGATCTCGNCTAT AGAGAGAGTGCGATAATGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGG AGCAGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCCCTATA GTGAGACNNNNNNNANGNNNCNNNANCNNCNNACGACNNCNNNGNATNCGANATGANATT CAGAAGCGATGCACCGGCTCGGCCGCGATTAACGTTATTGTTTTCTTTGTTAATGATTTC GGTTTTGTCGTCAACTCATCATCAAAGAAAATGTAAAAATGTTGTAAGCTTGTAAACACT AAATTCCTACCAAGTTTTGCAATAGATGCAATGAACAGCACTAAATTTATCTTCTATCAC ATGATCTCGTCAGGGACGTGTGGAGTACTATTCCCGGTCGCCATTTACAAGACACCAAAA AGAAAGAACACCGAATAAATAAATTATTAGAAAGTTTCTAAAAAGACTTACTGTCTGAAA AGAAAGATATAGCTAAAAAACAGTCCTCAATGAGAATTAGTTAGCAGCTA |
| GenBank Accession | FR808115 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20350446 - go to primer design |
| BLAST e Value | 2e-169 |
| Hit Clone Code (BAC ID) | F28P10 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g13150
| Sequence (A. th genome BLAST matches underlined) | >36-K114399-0022-334-D05-8409 ACGCTTCGTGATTTGATTCCTGCGGTGGAACAATCTGATTCAGATTTGATCCTTGATATT AAGCTGGCTTCATATTCGGCTAACCCGCCCGGCCTCTACNTTTTTGAATTGAATGACATT TGGTCATTACTNCTTTCTTTTTCTCCCTATTGACCATCATACTCATTGCTGATCCTTGTA TATTTCCCCGACATGAGCCCATTTACCATTGAATATGTATATTCATGTACATATTGTTTA CATGTACTAAACGCTTCATGATTTGATTCCTGCGGTGGAACAATCTGATTCACATTTGAT CCATGATATTAAACTGGCTCAGACGCGGCTAACCTGCACGGCCGCTAAAAANNNTGNNNT NNTNNCTTCTGTTCAACCACCCNNNCNTCNGANNNCCTGACGACGGAGCGGCATTCCGAA AAGATCCCTTGGCTCGTCTGGGTCGGCTAACCTGCCCGGC |
| GenBank Accession | HE664572 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:4174167 - go to primer design |
| BLAST e Value | 2e-30 |
| Hit Clone Code (BAC ID) | T19L5 |
| Hit Gene Code | At5g13150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | exocyst subunit exo70 family protein C1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |