SimpleSearch - Line and FST details


Line specific information

 
Line ID 038A12
Vector Used pAC161
Line Availability available as T3 set from NASC (N403564)
Segregation Analysis 50:38:24
Confirmed for Hit At1g22880
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g22880

 
Sequence (A. th genome BLAST matches underlined) 
>89-K015215-022-038-A12-8409
NTGATCCCATGTAGATTTCCCGACCTGAAGCCCTTTACATTTGAGTAATTGGGACAATAA
ATACGCCGGTGCCTCTGTTCTTCTCTCCCGAGTATGTCTCAATCCTTAAAATTCCTATGG
GATCCTCCCTATAGTGAGA
GenBank Accession AL763572 [GenBank]
Graphic View Graphic view of gene At1g22880
Predicted Position of Insertion Chr1:8096744 - go to primer design
BLAST e Value 3e-26
Hit Clone Code (BAC ID) F19G10
Hit Gene Code At1g22880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cellulase 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g42950

 
Sequence (A. th genome BLAST matches underlined) 
>89-K030267-022-038-A12-8409
TCTTTCGCATATCCCGATTATTATCAACTTGAACAGTCTGAACAAGCTCAGAGATCCTAT
CCCATCCAATTCCTCGCCAATAACTCCTAGAATGTTCTTCGTCTTCACCAGTATGGGATC
CTCCCTATAGTGAGTCGTATTACTCACTCCCTT
GenBank Accession CR934178 [GenBank]
Graphic View Graphic view of gene At2g42950
Predicted Position of Insertion Chr2:17864494 - go to primer design
BLAST e Value 5e-53
Hit Clone Code (BAC ID) F7D19
Hit Gene Code At2g42950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Magnesium transporter CorA-like family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 159B12


Last Updated on 10.06.2021 13:37