SimpleSearch - Line and FST details


Line specific information

 
Line ID 075D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N407150)
Segregation Analysis 50:43:43
Confirmed for Hit At5g65910
Parent of DUPLO pair none
Parent of pair(s) 12128

Gene hit At5g65910

 
Sequence (A. th genome BLAST matches underlined) 
>76-011890-strizhov-D10-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATGTGAATATAATCCCTGAC
TAGTACTATATCGCACTAGGATCCTCCCTATCATGACTCGTGTTATCTCCGCTTTCACGG
ACCACTCCTACCAAAGTCGGAAAGAATTGGCACTCTAATAAGAGATACTAACCACAAGGG
GATCGCTCCACTATAGAGACGATATCCCTGTGTTTGTTGCAAGAGTACAGTATACCTCCT
CCGCTCCCTTGGAGGGCAAGCTATGGGATGCTCCCTCTAAAGAGTCGTGGTACTCATCAC
ACTCGAGTTCATAAGATGTGGATCCGAAAGATTACGACGTAATCGGAGTTACAGAGGAAT
TAGTTGCGTTTGTGAAGGATCTTGCGATGCATCCTGAGACTTGGTTGGATTTTCCTTTAC
CTGATGACGACGATAGCTTTGATGGTAAGTTTTAGTTTCAGATCTTTCCTTATATATCTG
AAATTGTTGCGGGGAATAGTGAAGTTCAAGTTTGATTTTGTTTTCAGTTTATACGCACCC
ATGATGGGGGTACCGGGTGTTATAGAAATTCTCGGTAGACAGTTTTTATATCAAGGGGCA
GACTTTGGAGTGGCCGATGCAAAATACAAGCACGCGGTAGGCTGCCCCCGGCTATGGGAC
CTCCCCCATAGNGAGGCGATTTACCCAANGNNGCGNNGNNCNTCCGAAATAGGCACACGA
CGTGTCCCACGCGCGGAGGGGACGGGCGGCGCGGCGGGCGCGCGCGGCCCGCGCCGGCCT
CCCCCGCCCCCCTCTCCCCCTCGCCCCGTCCGGCTCGCCCCTCCGCCCCACCCGCCACCC
ACCCTCCCCACTCCACCCGCGGGCCGCCCGTCCCCGCCCCGACGCGGTCTCCCCGCTGAA
CAAAAAGAAACAAAAA
GenBank Accession AL768509 [GenBank]
Graphic View Graphic view of gene At5g65910
Predicted Position of Insertion Chr5:26363198 - go to primer design
BLAST e Value 6e-117
Hit Clone Code (BAC ID) K14B20
Hit Gene Code At5g65910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BSD domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37