SimpleSearch - Line and FST details


Line specific information

 
Line ID 084D04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit FCAALL

 
Sequence (A. th genome BLAST matches underlined) 
>28-011870-strizhov-D4-35St
CTGACGTAAGGGATGNACGCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAG
GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT
TCGGTTTAAGCTATCATTGGGAAATTTTACTAAAACTATGGGATCCTCCCTATAGTGAGT
CGTGTTACTCACTATTCGAAATGATGCGAGTAAATGTCTTCGTTATTTTATATAGTAGTA
AGATTGATAATTTAATAAGTCCGGTTTCATCTGACGAATCATAACTCACTAATGAAGTCA
GAAGAGAAAGAAGAAATCGTGATCTCGTTTAGTTAAGAAGAAACCATTAAAGAGGATAGA
GAGATTCCCAACAAATATGAGAGAAGAAGGCACCAACTTAAGTTACTGATAAACGAGCCG
ACATGCACGTGCTCTCTTCCCTTGTTACGCGTTCGTTCATTCTCATCGGATCCTATACGA
GCTTTTTTCATCCAACCGTCCTTATTTGTCCACGTGCATGCTCTGCACTCAACCCGTTCC
ATCATTTGGAAAATGACCACCAGTTCAATAACCCATCGTGCAAAAAACACAACGTAATAC
TCAAAAACTATTTCTATCGTTTGAGCACAAATTTTGTATCACGGGCTTTACTATTTCTTT
CTTGCTTGGGATTCCATGAACAAATTTTTCTTTAAATCTATGGGATCCTCCC
GenBank Accession AL769173 [GenBank]
Graphic View Graphic view of sequence AL769173 of line 084D04
Predicted Position of Insertion Chr4:9128144 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) FCAALL
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit AL769174 [GenBank]

Gene hit At4g36090

 
Sequence (A. th genome BLAST matches underlined) 
>28-012002-strizhov-D4-35St
TGACGTAAGGGCATGACGCACAATCCACTATCCTTCGCAGACCCTTCCTCTATATAAGGA
AGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTC
GGTTTAAGCTATCATTTGGAAATTTTACTAAAACTATGGGATCCTCCCTATAGTGAGTCG
TATTACTCANNANNNGAANCANNNNATNNGNNCTTCTTCCACTATTGGATGCCATGGAAG
TAGAAATCTTCAGGATTCTTCTTGGCTTTGATTCTGACATTCTTGCAATTTGAAAGCCGA
ATCAAAGGCTACTGTGATTTTCTTGGACTCTTTTTCTATGATTCGTGATTTTGAGT
GenBank Accession FR802439 [GenBank]
Graphic View Graphic view of gene At4g36090
Predicted Position of Insertion Chr4:17081079 - go to primer design
BLAST e Value 7e-52
Hit Clone Code (BAC ID) T19K4
Hit Gene Code At4g36090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation oxidoreductase, 2OG-Fe(II) oxygenase family protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37