SimpleSearch - Line and FST details
Line specific information
Line ID | 087G10 |
Vector Used | pAC161 |
Line Availability | available as unconfirmed T2 stock from NASC (N2108208) |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F17A8
Sequence (A. th genome BLAST matches underlined) | >087G10-LB-4-6187252-R-150-a TGACCAAAAATTGATGGCAGGGTAAAAAGACTCAAGATAATCCAAGGTCAAACCTATTTT AATTTCAGAACTTTATAATAATCGTTTTAAACTGAAATTGGTTTAATGTAAAAATTTAAC CAACCTGAACCGAGAACTACAATCAAAGTA |
GenBank Accession | KG781107 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr4:6187252 - go to primer design |
BLAST e Value | 3e-80 |
Hit Clone Code (BAC ID) | F17A8 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | KG781107 [GenBank] |
Gene hit At4g14940
Sequence (A. th genome BLAST matches underlined) | >087G10-LB-4-8542089-R-150-a TCACCAAATCCCTCCAAGAAACCACCACCCCCACGTCGTCGCTCATTCGTCGTGGTTCGA GCCGGTGGTCAAACCTACGAGCTCATCATCGACCTAACCACGAGCAAGATTGCATCCTCC CGCATCTACACAGGCCATGGTTTCCCCTCA |
GenBank Accession | KG781106 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr4:8542089 - go to primer design |
BLAST e Value | 3e-80 |
Hit Clone Code (BAC ID) | FCAALL |
Hit Gene Code | At4g14940 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | amine oxidase 1 |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Gene hit At5g67420
Sequence (A. th genome BLAST matches underlined) | >087G10-LB-5-26905778-R-150-a TTAAAACAATTATATTAATTGATTACTGCAATTTTTATTCCACAATAAATTAGAAACGGA TTTTTACACATTTTTTTAATAATAGTCTTTTTATTGGTTGGTAACGTTTGTGAAGTGACC TTAGAGAGAGAGAGTGTGTGTGTGGTAAAA |
GenBank Accession | KG781108 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:26905778 - go to primer design |
BLAST e Value | 3e-80 |
Hit Clone Code (BAC ID) | K8K14 |
Hit Gene Code | At5g67420 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | LOB domain-containing protein 37 |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | KG781108 [GenBank] |
Gene hit At3g28330
Sequence (A. th genome BLAST matches underlined) | >087G10-LB-3-10586739-F-150-a TTACACAATGGAGACATTGTGCTCCACAAGGATGTGGAACATAGCAGCGCGGGTCGCATT CTGAATTCCGTTGATTGCCCGAGAGATATGACATACATCTTAGAATCAAACTTTGCCTCG TTCGTTCTCCCACAGTGGATGCATCCGTTC |
GenBank Accession | KG781105 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr3:10586739 - go to primer design |
BLAST e Value | 3e-80 |
Hit Clone Code (BAC ID) | MZF16 |
Hit Gene Code | At3g28330 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | F-box family protein-like protein |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Gene hit At1g43640
Sequence (A. th genome BLAST matches underlined) | >087G10-LB-1-16441515-R-150-a TTCCAACAATTGTTTTTCAAGAAATCAATGTCTTTTGACAACCGTACTAAACTTATTCTT TTCTCTACCTCACTGAATTCCAAAGCTGAATATAACCTAAGATTTCAAGAACATAAACCT AAGAAGATTTCAAGAACACAAACCTAAGAT |
GenBank Accession | KG781103 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:16441515 - go to primer design |
BLAST e Value | 3e-80 |
Hit Clone Code (BAC ID) | T10P12 |
Hit Gene Code | At1g43640 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | tubby like protein 5 |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | KG781103 [GenBank] |
Gene hit T1B8
Sequence (A. th genome BLAST matches underlined) | >087G10-LB-2-14300641-R-150-a TTTTCGAATTTGTCAAAGACTGTAAGTACTAAATTGGGCTTGATGGGCTCTTCATTGGAC TAACATAAATGTCTCGGACAAGTGTATGTGTTCTTCCTTGTACATTTTCACCTGCAACCT TATCAGCCATAGCTATAGCATTCTGAAATA |
GenBank Accession | KG781104 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr2:14300641 - go to primer design |
BLAST e Value | 3e-80 |
Hit Clone Code (BAC ID) | T1B8 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | KG781104 [GenBank] |
Last Updated on 10.06.2021 13:37 |