SimpleSearch - Line and FST details


Line specific information

 
Line ID 092H04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F25A4

 
Sequence (A. th genome BLAST matches underlined) 
>32-011955-strizhov-H4-8409
TGATCCATGTAGATTTCCCGGACATGATAGCACTTTACAATTGACACCCAAATATTTTGT
TTTGTTTTAATTCAGTAATTATTATAGACTTCTTGTCTTATATTATATGTCTATAGCATT
ACCTAAACTACCTGAATCTACAATTTTTTTTTTTGCTTTTGGGTTTCTAAAAAACAATAT
TAAAAAACGGGTTTCTTACCAATATACATACATATGTTTATTTACAGATTTATCGAGGGG
AAAAGGCCTTCATTAATTTTTCGAATAAAAAAAAAAAACTTGGGGTGGCCAAATTCAAAA
TAAAAACGGGCTTTGGATTTTCTTAACAAAAAAAAACCCTAGGGGATCCCCCCTATAGGG
A
GenBank Accession AL769810 [GenBank]
Graphic View Graphic view of sequence AL769810 of line 092H04
Predicted Position of Insertion Chr1:28083057 - go to primer design
BLAST e Value 2e-65
Hit Clone Code (BAC ID) F25A4
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g05783

 
Sequence (A. th genome BLAST matches underlined) 
>32-012001-strizhov-H4-35St
TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAGGAAG
TTCATTTCATTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCATTA
TGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTAATTCAAAAATGTATATGTCCGCAG
CGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTA
TTGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACA
TTCACGTCCAAATGGGGGCTGAGATGAGAAACTTCACGATCGATGCCTTGATTTCGCCAT
TCCCAGATACCCATTTCATCTTCAGATTGGTCTGAGATTATGCGAAAATATACACTCATA
TACATAAATACTGACAGTTTGAGCTACCAATTCAGTGTAGCCCATTACCTTACATAATTC
ACTCAAATGCTATGGGATCCTCCCTATAGTGAGGGTTATTAACTGGAATNGAGNATGGGN
AAACAAAGGACTACGGGTGGAGATTCGGGAGATGACCGAGACCAGACGACGGGAACTGGC
TACGACTCATTAATGGCTTCGTCGGAGAAATATTTGGGAAGAAGGCACACAACGGGTTCT
TTTGGAGGAGGTCTTCATACAAGGGGCTATTTTTGGAAATTGGGTGAAGTTGGGAAAACA
ACCCGGGGGGACTAACGGAAAGGATTTCGGGGAAGGGGGATCCGGGAACAAGACCC
GenBank Accession FR802800 [GenBank]
Graphic View Graphic view of gene At1g05783
Predicted Position of Insertion Chr1:1729645 - go to primer design
BLAST e Value 8e-27
Hit Clone Code (BAC ID) T20M3
Hit Gene Code At1g05783 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37