SimpleSearch - Line and FST details


Line specific information

 
Line ID 141E03
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F13I12

 
Sequence (A. th genome BLAST matches underlined) 
>21-K012894-022-141-E03-35St
ATGACGTAAGGGATGACGCACAATCCCCACTATCCTTCGAAGACCCTTCCTCTATATAAG
GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT
TCGGTTTAAACTATCAGTGTTTGAGACTTAGAAAATATAGCTCATTGTTATAACAAATAA
GCCGAAATAGAAATTGGACCAATTGAAAAAATGAACGAACATTTTGGTTATAAACGTTAC
ATCTATAGATAAAGAAACTTTAGGGATACCAAGCTGTATTCGAAAGCAAAGACGTCCGGA
GCGATACCATATAGTACATCCTTCACAGTTGAGGATCTGAACTTAAAGATAGGATCTTAC
TATACCGCAAGGTACGCTTGAAAGAGTCACAGCTGCCAACCTGAGGGGGGACTTAAGTGA
AAAGAGTAACATTGCATGATTGGGTTAGAAGCTACCGAA
GenBank Accession FR804141 [GenBank]
Graphic View Graphic view of sequence FR804141 of line 141E03
Predicted Position of Insertion Chr3:17372710 - go to primer design
BLAST e Value 3e-05
Hit Clone Code (BAC ID) F13I12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g31700

 
Sequence (A. th genome BLAST matches underlined) 
>21-K012877-022-141-E03-8409
TTGATCCATGTAGATTNTCCCGGACATGAAAGCCTTTACAATTGAATCAGGGCATAATAG
ATGGATGGAGCTGTAGACTCGCTGTGATCAGAAAACAGATATAGACTATCGGTATACTTC
GTACTTTAGAATGGTCTTACTCGTATGGCATAAATCTTGAGACAAGCCCAAAGCGATTGT
GTACCCATGTCTTGGAACAAAAACAGCTGAATATGAACTCGAACTAACTTTTTAATAGCC
GGAGAAGAAAAGAGAACATAACTATGGGATCCTACCTATGGTGAGTCGTTTTAGTCAGTT
AGACTAATTCTCGTGTTTCTTTAGTGAACATTTCCAAATCTATGGGATCCTCCCTATAGT
GAGTCGATTTACTC
GenBank Accession AL765617 [GenBank]
Graphic View Graphic view of gene At4g31700
Predicted Position of Insertion Chr4:15346064 - go to primer design
BLAST e Value 2e-52
Hit Clone Code (BAC ID) F28M20
Hit Gene Code At4g31700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ribosomal protein S6
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37