SimpleSearch - Line and FST details
Line specific information
Line ID | 141E03 |
Vector Used | pAC161 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F13I12
Sequence (A. th genome BLAST matches underlined) | >21-K012894-022-141-E03-35St ATGACGTAAGGGATGACGCACAATCCCCACTATCCTTCGAAGACCCTTCCTCTATATAAG GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT TCGGTTTAAACTATCAGTGTTTGAGACTTAGAAAATATAGCTCATTGTTATAACAAATAA GCCGAAATAGAAATTGGACCAATTGAAAAAATGAACGAACATTTTGGTTATAAACGTTAC ATCTATAGATAAAGAAACTTTAGGGATACCAAGCTGTATTCGAAAGCAAAGACGTCCGGA GCGATACCATATAGTACATCCTTCACAGTTGAGGATCTGAACTTAAAGATAGGATCTTAC TATACCGCAAGGTACGCTTGAAAGAGTCACAGCTGCCAACCTGAGGGGGGACTTAAGTGA AAAGAGTAACATTGCATGATTGGGTTAGAAGCTACCGAA |
GenBank Accession | FR804141 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr3:17372710 - go to primer design |
BLAST e Value | 3e-05 |
Hit Clone Code (BAC ID) | F13I12 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At4g31700
Sequence (A. th genome BLAST matches underlined) | >21-K012877-022-141-E03-8409 TTGATCCATGTAGATTNTCCCGGACATGAAAGCCTTTACAATTGAATCAGGGCATAATAG ATGGATGGAGCTGTAGACTCGCTGTGATCAGAAAACAGATATAGACTATCGGTATACTTC GTACTTTAGAATGGTCTTACTCGTATGGCATAAATCTTGAGACAAGCCCAAAGCGATTGT GTACCCATGTCTTGGAACAAAAACAGCTGAATATGAACTCGAACTAACTTTTTAATAGCC GGAGAAGAAAAGAGAACATAACTATGGGATCCTACCTATGGTGAGTCGTTTTAGTCAGTT AGACTAATTCTCGTGTTTCTTTAGTGAACATTTCCAAATCTATGGGATCCTCCCTATAGT GAGTCGATTTACTC |
GenBank Accession | AL765617 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr4:15346064 - go to primer design |
BLAST e Value | 2e-52 |
Hit Clone Code (BAC ID) | F28M20 |
Hit Gene Code | At4g31700 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | ribosomal protein S6 |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |