SimpleSearch - Line and FST details


Line specific information

 
Line ID 153F06
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g52550

 
Sequence (A. th genome BLAST matches underlined) 
>81-K018348-022-153-F06t-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACAGTGATGATATACATTAAATTATTTAT
TCATTAATAAGTACTGTATTTTCAGGTATTGACACGAGTTCAGTTCCTTTACAGAACACA
CAATATCTTTTTTTTTGGCCTGGTGAAATAGCAAATTTAATTTAAAAAACAACATGTGAA
TTTTCCATGTTTCGGGGCACATTATTAAACAAGATTTTATTTCCCTCCCCTCCTTGGGTA
TCTAGAACGGAATTGTCCACCACCCTTCTTTTTGTTGGCGAACCAAAATCAAACTTATTT
ATATCGAAAAGCGGACGTGGGGTGTAACTGCCCATTGATAAAAAAAGGGGAACGGATTTG
GTAAAACCGACCTATGGATCCACCCTATAACTCACGAGCAGCCGAAAAAAACACCCCCTT
TCGTTTCCCTTCTTTTTTTTGACGTTCCGGGAGAGTATCCTTTTCTTTTAAAAACCTTTT
C
GenBank Accession FR804603 [GenBank]
Graphic View Graphic view of gene At1g52550
Predicted Position of Insertion Chr1:19574302 - go to primer design
BLAST e Value 3e-14
Hit Clone Code (BAC ID) F6D8
Hit Gene Code At1g52550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit FR804603 [GenBank]

Gene hit MXK3

 
Sequence (A. th genome BLAST matches underlined) 
>81-K018347-022-153-F06t-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTAAATTGAAGACATGTAGCGTCAACTTAT
TCACCCGTTAATTTTAAATTGGCTGTTCATGGAACTTAAAACGTACGAGCACACATCTTT
TTTCTCAAATATGACTGAAATAGTGAAATTGGAAATGAAAATTAAGAATCAACATGTATA
TATATCATGTAACGGCTCGCATCATTAAACATGAATTTATGTTAATCGCCTCCATGACTA
AATAGTTCGGGATTGTTAATAGCAGTCATACAGTTGACGAAGCAAAGTCGTACTTATTTA
TATCTTATTGTGGACTTTTTTGTTGCTGTAGATGATATTTAAGTGGATACAGATTCACTA
ACGTCGGCTATGGGAT
GenBank Accession BX285175 [GenBank]
Graphic View Graphic view of sequence BX285175 of line 153F06
Predicted Position of Insertion Chr5:25920642 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MXK3
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37