SimpleSearch - Line and FST details
Line specific information
Line ID | 153F06 |
Vector Used | pAC161 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g52550
Sequence (A. th genome BLAST matches underlined) | >81-K018348-022-153-F06t-8409 TGATCTGAAATTTCCCGGACATGAAGCCTTTACAGTGATGATATACATTAAATTATTTAT TCATTAATAAGTACTGTATTTTCAGGTATTGACACGAGTTCAGTTCCTTTACAGAACACA CAATATCTTTTTTTTTGGCCTGGTGAAATAGCAAATTTAATTTAAAAAACAACATGTGAA TTTTCCATGTTTCGGGGCACATTATTAAACAAGATTTTATTTCCCTCCCCTCCTTGGGTA TCTAGAACGGAATTGTCCACCACCCTTCTTTTTGTTGGCGAACCAAAATCAAACTTATTT ATATCGAAAAGCGGACGTGGGGTGTAACTGCCCATTGATAAAAAAAGGGGAACGGATTTG GTAAAACCGACCTATGGATCCACCCTATAACTCACGAGCAGCCGAAAAAAACACCCCCTT TCGTTTCCCTTCTTTTTTTTGACGTTCCGGGAGAGTATCCTTTTCTTTTAAAAACCTTTT C |
GenBank Accession | FR804603 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:19574302 - go to primer design |
BLAST e Value | 3e-14 |
Hit Clone Code (BAC ID) | F6D8 |
Hit Gene Code | At1g52550 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | transmembrane protein |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | FR804603 [GenBank] |
Gene hit MXK3
Sequence (A. th genome BLAST matches underlined) | >81-K018347-022-153-F06t-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTAAATTGAAGACATGTAGCGTCAACTTAT TCACCCGTTAATTTTAAATTGGCTGTTCATGGAACTTAAAACGTACGAGCACACATCTTT TTTCTCAAATATGACTGAAATAGTGAAATTGGAAATGAAAATTAAGAATCAACATGTATA TATATCATGTAACGGCTCGCATCATTAAACATGAATTTATGTTAATCGCCTCCATGACTA AATAGTTCGGGATTGTTAATAGCAGTCATACAGTTGACGAAGCAAAGTCGTACTTATTTA TATCTTATTGTGGACTTTTTTGTTGCTGTAGATGATATTTAAGTGGATACAGATTCACTA ACGTCGGCTATGGGAT |
GenBank Accession | BX285175 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:25920642 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | MXK3 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |