SimpleSearch - Line and FST details


Line specific information

 
Line ID 181B02
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit MSJ11

 
Sequence (A. th genome BLAST matches underlined) 
>10-K013603-022-181-B02-8409
CTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATCTCTTGACGGATT
GCTGGTTGCATGCTATCACATGATGAGGTGTCCCATCCTAAGTAGCTAGTCCTGGCGAGC
TCGCGCTACCATGCTATATCGAAACTATGGGATCCTACGTATAGTGTGACATGGTGAGAC
TCATGACCTGAGTTTGGGCACAGACTGCTGAGATAAACACGCCCGGAACCATTTTTTTTG
AACCGACTAATAAACCCTACCTATCTGTGTGACAGCTGAGACATTGGCATTACAGTTAAA
GCTAGCAAAAGTTAAATCTTGCATTTTTAGCATATGTACCCGTGAGTTTGCTTGTGGCAA
ATTAAAATACCGCTAGTTAGTTCGCTTTCATTTGAGAAAATATAAGACAGTTTTAACAGT
TTCTGAAACAAGAAAGCTATGATATACTTGACATATGTTTATGAGAAAGGGATAAACACG
AACGAGCGAGAACACACACGAGAAACAAGATGGTTTCTAAACACCCCCAAGAGCACCAAC
TTCGTCAAAACCCTA
GenBank Accession AL771528 [GenBank]
Graphic View Graphic view of sequence AL771528 of line 181B02
Predicted Position of Insertion Chr3:5362170 - go to primer design
BLAST e Value 6e-111
Hit Clone Code (BAC ID) MSJ11
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit T8P21

 
Sequence (A. th genome BLAST matches underlined) 
>10-K013612-022-181-B02-8409
NTTTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAAACTCTTGAAGGA
TTTCTGATACGCATGCATACAATTGATAAGGAGTCCAACCTATAAGTAGAAGGTCCACCG
AGAGTAGTAGAACCCAGGCTATATCGCGCTATGGGATCCTCCCTATAGGAGAGCCCTGGG
GAGAGCTAGGCATTCCGGGCGATAGTGACTTATGTGAACCACCCAAACGTCAGAAAGCCT
GACGACGGAGCAGCATACCAAAAAGATGCCTTGGCTCGTCTGGGTCGGCTATGGGATCCT
CCCTAATAAGAGGAGACGAGATGAGTTTTTTCCTCTGTTTCCATGTTTGTAGCTGTATAT
ATATATTGTGTAGCTATGGGATCCTCCCTA
GenBank Accession AL771529 [GenBank]
Graphic View Graphic view of sequence AL771529 of line 181B02
Predicted Position of Insertion Chr2:15942761 - go to primer design
BLAST e Value 5e-28
Hit Clone Code (BAC ID) T8P21
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37