SimpleSearch - Line and FST details


Line specific information

 
Line ID 219B05
Vector Used pAC161
Line Availability donated as individual T3 stock by SALK (N922923), homozygous for At1g04120 (Chr1:1066010), TDNA-Seq FST GenBank-ID: KG782916
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g04120

 
Sequence (A. th genome BLAST matches underlined) 
>219B05-LB-1-1066010-R-150-a
GGCCTCTCCTACAATCTGACTGTACTGATAAATCCTTTCGATTGAGATTATTTTGTTTTC
AAGCTTACAAAAGCTAAGTATCCATCGTGATAGACGTCCATTCAAGTTAAGTCCATATGT
CACAGCAAGACCTGCCATGCCTATTACAAC
GenBank Accession KG782916 [GenBank]
Graphic View Graphic view of gene At1g04120
Predicted Position of Insertion Chr1:1066010 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F20D22
Hit Gene Code At1g04120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation multidrug resistance-associated protein 5
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g39400

 
Sequence (A. th genome BLAST matches underlined) 
>219B05-LB-4-18324420-R-150-a
TTTGTGATGCCATTATTTTATTTATTTTTAGTATCCTCTTGCATTAATTAACTTTTTTTT
TATAACCACATACAATAATTAAAAGTAGTATTATTTGTTTGTATCTGTTATCGAAATTGA
AATTAATATATATAATTTTTATAATAATCA
GenBank Accession KG782918 [GenBank]
Graphic View Graphic view of gene At4g39400
Predicted Position of Insertion Chr4:18324420 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F23K16
Hit Gene Code At4g39400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich receptor-like protein kinase family protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit KG782918 [GenBank]

Gene hit At3g08947

 
Sequence (A. th genome BLAST matches underlined) 
>219B05-LB-3-2726753-R-150-a
CTTTCCGCTTCTCTCTATCGTATCATGTGAATAGTGGTTAGTTTTTTTTTGGGTAAAAGT
AGTTTAATTCCCCTCAGGCCATATCTGTTTGAGGTTGGGTCTTATTTTGTTCTCTTGGGG
TAGTTAATGCAAAACTCTTTTATTGTTCTT
GenBank Accession KG782917 [GenBank]
Graphic View Graphic view of gene At3g08947
Predicted Position of Insertion Chr3:2726753 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) T16O11
Hit Gene Code At3g08947 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ARM repeat superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown
Other FSTs Supporting this Hit KG782917 [GenBank]


Last Updated on 10.06.2021 13:37