SimpleSearch - Line and FST details


Line specific information

 
Line ID 265B03
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g02820

 
Sequence (A. th genome BLAST matches underlined) 
>18-K014990-022-265-B03-8409
TTGATCCATGTAGAATTTCCCGGACATGAAGTCCTTTACAATTGAATATATCCTGCAATC
CAATGGATAGCAGTTTCATTCATTGGATAACACATTGGAATCTTCTGGATCAAGTTTTCT
CTATGGGATCCTCCCTATAGTGAGAAGNCACTGGTCAAAAAGTATTAATTCTTTAAAAAA
ACCTCTTTTTGTGTTGCATAATGAGCTATGGGATCCTCCCTATAGTGAGANNAANCACGN
NNNCTTTTATCTCCGGTCCACCAACAATAAGATTATCAAATTTCCACACCTCTCATAATT
CACATCCCCATTGTCCGTCTTTTTATAATTATTTTCCATAATTCGAACATTAAATATGAT
ATCGAAAATTAACCCCCAAACTATTGAATTACAATGATGTGTGAACAAACCGCAAAATAA
ACCCTACTTAAAAATATGCCCTCCTTACACTAACAAACCAAGACCATGAACAATCCAACC
GenBank Accession AL942324 [GenBank]
Graphic View Graphic view of gene At1g02820
Predicted Position of Insertion Chr1:623682 - go to primer design
BLAST e Value 5e-62
Hit Clone Code (BAC ID) F22D16
Hit Gene Code At1g02820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Late embryogenesis abundant 3 (LEA3) family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At5g07760

 
Sequence (A. th genome BLAST matches underlined) 
>18-K014998-022-265-B03-8409
GGACATGAGCCATCATATAATAAACGTTCTTATCATTGCTAAAGCTAAAGTTCCATTAAA
AGATATTTACGTGTGATTAATGCGTTTTCTTCTCTCATCCATTTTGCTTCCGCAGTACTT
CCTATGGGATCTCNCCTATAGTGAGANNNNNNNNNNNNNNNNNTNNCCNNTNTNNNTTNN
NNNNNNNNNNGANGNNNNNTNNNNAGANANANAAGNNANNNNNNNNNNNAANNAGAAAAA
NAAAAAAGAAAAGAAGAAAAANAGGNAGAANNAGAAAGAGGGGAAATAGGAGGGATGAGA
TTAGTTATGAATATAGGGGAATGTATGATAGGTTGNGAGGTGAGTGTGTGAAAGGGGCTA
TTAAATGAAGAGGATATTATTTGATAAAATTTGGAAAGAAAATATGGGTGAAAAAATATT
ATGATATTGGGATAAAATAGAGGGGGAAAAGATTATATATAGAAGTATGAAAAAAGAAGA
TTGGGGATTGTTTTAAAGGAAGGTGAAAGAGAAAGNTTTATTTTTTGGGTTAAAGAGAGA
AATAATGGATAAGAAAGTGGTA
GenBank Accession AL942325 [GenBank]
Graphic View Graphic view of gene At5g07760
Predicted Position of Insertion Chr5:2471820 - go to primer design
BLAST e Value 1e-37
Hit Clone Code (BAC ID) MBK20
Hit Gene Code At5g07760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation formin homology 2 domain-containing protein / FH2 domain-containing protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 265D03


Last Updated on 10.06.2021 13:37