SimpleSearch - Line and FST details


Line specific information

 
Line ID 299H05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 9007

Gene hit T10J7

 
Sequence (A. th genome BLAST matches underlined) 
>40-K015556-022-299-H05-8409
NATTTTGATCCATGTAGCATTTCCCGGACCTGAAGCACTTTACAATTGATTATATTACAC
TCGTTATTCTAAACATTCACATTTTATCATTCTTCGACTCGAAATGAGCTTATTGCTGCG
ATCCACTTTAATAATTCGCTATCATACAAGTATATTATCAGAACCATGGCCTCTGTGAAT
ANATGTATACCTTCGTACATGTGTATTATAGAAACTTTGAATTGTCCTTCAATATCATGT
TCCATCATCCTTTGACCTCATGTATAGCCATTAAAATAATTACCACACTATGTAAAATAA
TTTCACATGACCACCAACATTCTCCAATGGTCAAAGGTTTAAATTTTTGAAAAATGTGTA
AAAGTGTTTGGGATACATTTGGCTATTTAAATTTTTGAAAAAATGTGTAAAAGTGTTTGG
GGTACATTTGGCTCTCAAATCGTGACATACTCCACACTCTCAAAACTCACACACTATGGG
ATCC
GenBank Accession AL946904 [GenBank]
Graphic View Graphic view of sequence AL946904 of line 299H05
Predicted Position of Insertion Chr2:4872187 - go to primer design
BLAST e Value 5e-170
Hit Clone Code (BAC ID) T10J7
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g56130

 
Sequence (A. th genome BLAST matches underlined) 
>40-K015515-022-299-H05-8409
CTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACACTTGATCATCTCCACCGTTA
TACTCACCAAACCAATTTCGAGAAACTCCGACGCGATTTGAGGCTTTTGCAACACCATTT
GATAAATCGCTATCAACGAAGATATTGTCGAACTATGGGATCCTTCCTAGATGGATGCCT
CTAAACGTGTGTGCAATCGATGCCTGAAGACGTCCCCCTCAATACGTCTGGACTTTCACA
TAACCTCGGGCACTGTATGGAAATACTAACCACTCGATGACTTATAATTTAGCGTTACCC
ACATCACACTCAAGTGGTCACAGGTCGAAATTACTGATTTGAGGAACTAAGGGCAAGGGG
TACTTACTGGCATACATACTCCTGAAAAAGGAAATAAGACGCGAGGCGACGGATGGATGT
CTATGAAACACATACTGCCCTATCGCAGACCTGACGATCTACGACAACCTTTTATGGGCG
CGCACGCTTAACTGTTTTTAATATGTAGGACTTTTGGGATCAATGCGTTGTCTGGCCCTG
TTCCTAAGGAAATTGGTTTGCTTACAGATTTAAGATTACTGTAAGCTTATGGATGCTTCT
TCATTGTTTTAATATAATTGTCTCTTCACAATGTTTCTGAAAGATCTTGACGGTTCCTTA
TACATATGCATATCTTTTTGCAGCGGTATTAGCTCAAATAACTTTTCCCGTTCTATACCA
CATGAGATTGGGGAGAGGCCCAAACTACAACAGAGGTGAATCTATCTGGTAAATCGGCAA
GCGTT
GenBank Accession AL946903 [GenBank]
Graphic View Graphic view of gene At1g56130
Predicted Position of Insertion Chr1:21000322 - go to primer design
BLAST e Value 2e-135
Hit Clone Code (BAC ID) T6H22
Hit Gene Code At1g56130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat transmembrane protein kinase
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37