SimpleSearch - Line and FST details


Line specific information

 
Line ID 329F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N431557)
Segregation Analysis 50:49:31
Confirmed for Hit At5g15630
Parent of DUPLO pair none
Parent of pair(s) 4044, 4126, 4179, 4269

Gene hit At5g15630

 
Sequence (A. th genome BLAST matches underlined) 
>70-K016035-022-329-F09-8409
TGTCCTGATATTTCCCGGACATGAAGCCTTTACATTGAATATATGCTATTACCGAAGGTG
GGAATCGACAATGTGATCCGCCGGGTACCCTGTCTGCTCCTAATGGATTGAACTTCCTTA
TATGCAGGTAATGGTCTTGCAAATGATAGAGGGATCCGTGCGTCCTCACTTACGTCAGAG
GAGATATCACATCAATCCACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCACG
ATGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCGCTGTGGGCAGAGGCATCTTCAACG
ATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGGCACCTTCCTTTTCCACTATC
TTCACAATACAGTGACATATAGCTGGGCAATGGAGTCCGAGGAGGCTTCCGGATATTACC
CTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTGGATATTTTTG
GAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCATTGAGT
CGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGTTCTGTTAGGTCCTCT
ATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTATGGATCTCCCCCACAAAAAGA
GAGACAGGGTTCTTTTTACCTTGATCCCGGCCATTGATCAATGACTCTGAACTTCTTGGG
CTTTTGCTTGGGGAAACAAGGGGAAAGGGAACCATTTTGTTTGAATGGAAAAGTGGGCAA
AAAACGAAAGGGTTTTATTTGGGCTCAATGAACGGATTTTGGATCCAGGCCCATAAAGGC
CTGGGTTAACATTCGCGCGTTTCA
GenBank Accession FR808027 [GenBank]
Graphic View Graphic view of gene At5g15630
Predicted Position of Insertion Chr5:5086670 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F14F8
Hit Gene Code At5g15630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR808027 [GenBank]


Last Updated on 10.06.2021 13:37