SimpleSearch - Line and FST details


Line specific information

 
Line ID 345H10
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F13C19

 
Sequence (A. th genome BLAST matches underlined) 
>80-K016239-022-345-H10-8409
TTTCCCGGACTTGAAGTCATTGATTTTTTGCCTTTTTTCCTGGAAATCTGTTACTATGGG
ATCCTCCCTGTATGAGTGACGTGAAGCTGGCTTATGCGATCTTCTACAATGCTACCTACA
AGATATACATGTTAGACCATACCTGCAAAAAGTTTAGGTATCATCGACAATGGTGTCATC
CTGCAACTATTAAAGGTAATAAAAATGCTCAAAGAAAGTGTCGTGCTGGTCTATTGACAT
GGCCTCCATTCCCTATGGGATCCTCCCCTATAGCGAGACTATACTCAGAGTGACCCATGG
TTAGACCAGAATTCGCGTAAACCGACTCTTACCCTATGGGATCCTCCCTATAGTGAGACN
GNCNAGAATACTGAATGGGCTGTTGGTCGAGTGATGTGGTCCAGTATATATTCCCCCCTT
GCTCTTTCACCCAGATCTTCATATTCTCCTGGATTCTCAACTGCTTTGTGTTCATCTAAC
AGCTTCTGGTACCCCATAGTCTCCAAATGTTAATCTACTTCGTTGCTATCCTTTGGTAGA
GCACTCTGTAAATGATCCCTTTCTCCTA
GenBank Accession AL952779 [GenBank]
Graphic View Graphic view of sequence AL952779 of line 345H10
Predicted Position of Insertion Chr5:11921503 - go to primer design
BLAST e Value 6e-86
Hit Clone Code (BAC ID) F13C19
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g04680

 
Sequence (A. th genome BLAST matches underlined) 
>80-K016233-022-345-H10-8409
ATTTCCCGGACTTGAAGCAATTGATTTTTTGCCTTTTTTCCTGGAATCTGTTAGCTAGGG
AGATCCTCGCTATAGGGAGCTGTCTTCATGTCCCCAATAGAGACCTACCAGCGAATTCAA
CATTCGCCTGCTAAAACATACAAGCTATGGAATCCTCCCTATAGAGAGAAAAGGCTATCC
GTAATTAACGTTACATTATCGAGCTGATGCATCATTCTCTCAAGCAAATGACATGGCTCC
TCTCGTCTCTAAGACAGTCATACTGACTCAAGCCATGCCAATGATCCAGCGATCAACTAC
TTGCTATGGGATCCTCCCTATATATGAGACCATGCGATCCTCCCTCTCTCTTGACGACGC
CACACTATGTCATGGAGTCCTGACTAGAAGAGTTGATGCCNGCCCGGAGAATGTGAGGAT
GTCCTCTCTATATCGTGACCCTTATGTCCTGCGTGACACACGTGCCACAATGGCCTAGAC
GAACGGTCACGATCCCTCGCATGGTGAGACTACTCCAAAAACCCGTCCTGACAACGGACT
GTAGGCTGCTACTCGGCTGTTTGAAACCGGAATCG
GenBank Accession FR808431 [GenBank]
Graphic View Graphic view of gene At3g04680
Predicted Position of Insertion Chr3:1269845 - go to primer design
BLAST e Value 6e-46
Hit Clone Code (BAC ID) F7O18
Hit Gene Code At3g04680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CLP-similar protein 3
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37