SimpleSearch - Line and FST details
Line specific information
Line ID | 371F12 |
Vector Used | pAC161 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Note |
Gene hit At5g38140
Sequence (A. th genome BLAST matches underlined) | >94-K017074-022-371-F12-8409 ATTTCCCGGACTGAAGCATTTACATTGAATATAGCCATTTTATATTTCACAACAGATGAT GAAAAATCTTTGAAGATGTAGAGTTTGGCAAGAACAAGGGTTCTCTATATATGGAGCTAT GGGATCCTCCCTATAGTGAG |
GenBank Accession | BX003397 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:15222027 - go to primer design |
BLAST e Value | 1e-37 |
Hit Clone Code (BAC ID) | F16F17 |
Hit Gene Code | At5g38140 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | nuclear factor Y, subunit C12 |
Insertion Classification | TS2TE (5') |
Confirmation Status | failed |
Gene hit At1g63810
Sequence (A. th genome BLAST matches underlined) | >94-K017095-022-371-F12-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCGATGGAAGCTGTT GCGCCTCGTTACACATAACACGATGCCAGTGCTTGATCAATTTCTATCTAATCATCGTGA AACAGCAAGGTAAATTTAGTCAATCCTATGGGATCCTCGCTATAGTGAGACAACTTCACC GTCGATTTTCTCCTCATCTGAAGAACAACATAATTTAATTTCTAAAGCAATGTTGCTTCT GATTATGCTAATAATCTCTATTTCCAACATTGTAGTCTCTTACTGAGAACTTCTTATGAA CATCGTAATTTAGCTCTGCTTCCCATGATGAGTTTATACGATGATGATACCCTCATACGA CATTCTACGATTTGAGACTACATCCTGGCTTTCAGATATATATACATTACACCTTTCATT ATATTGCTCTTCTTCTCCTTCTACTTAAACC |
GenBank Accession | BX003398 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:23675965 - go to primer design |
BLAST e Value | 1e-53 |
Hit Clone Code (BAC ID) | T12P18 |
Hit Gene Code | At1g63810 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | nucleolar protein |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |