SimpleSearch - Line and FST details
Line specific information
Line ID | 403H03 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N438679) |
Segregation Analysis | 50:48:48 |
Parent of DUPLO pair | 12335 |
Parent of pair(s) | none |
Gene hit At5g01630
Sequence (A. th genome BLAST matches underlined) | >24-K017864-022-403-H03-8409 ATTCCCACAAACAATATCAGATGGATACAGCTGAAACTATGCCGAGGGTCAGGACGGCCT TGGGGAAAACTGTCCCTTTGAAAGAGTCTTCAATTGCCAAACCTTTGTCTATTCTATGGG ATCCTCCCTATAGTGAGAGGATGGGATCCTCCCTATAGCGAGAGANGNGCNGNCCANNCN AGCGGGGGGCCCGGCGTACAATCAGAGAGAGACTGAATAATCCGGAGCAGGAACATGCCG GAGGAAACCATCAACGAGTGGAACGAAATATACAT |
GenBank Accession | BX287687 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:240470 - go to primer design |
BLAST e Value | 2e-39 |
Hit Clone Code (BAC ID) | F7A7 |
Hit Gene Code | At5g01630 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | BRCA2-like B |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Gene hit At1g56130
Sequence (A. th genome BLAST matches underlined) | >24-K017818-022-403-H03-8409 AGCTCGCGCTGTTGTATCCACACTCAATCACAACGGTCAAATTAATATAACCGGTCAATG TATTAACAGAAACTAACCGGTAAGTATCTTATTATTTTGGAATTTGTGGATACGATTCAT GGTGTATTTTTTGTTTCTAATCAATTTGGATCCGAATAACTATGGGATCCTCCCTATAGT GAGAGGAAGCGTCCCTATATCTAGTGGGATGCGATAGAATATTAACTCCAGAGGATCTGT CCAATTATGCACCTTGGTTGATTAAGAATCAAAGAAGAAATGGACAATCGGACCCTCCAC TTCGCGCAGGAAACCATCGCCGCTGGAATCGGAAAATAAATGCCACGTCGACATTTATTC AGTCCTATGGGATCCTCCCTATAGTGAG |
GenBank Accession | BX287686 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:21000501 - go to primer design |
BLAST e Value | 6e-77 |
Hit Clone Code (BAC ID) | T6H22 |
Hit Gene Code | At1g56130 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Leucine-rich repeat transmembrane protein kinase |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |